Protein Info for DvMF_0708 in Desulfovibrio vulgaris Miyazaki F

Annotation: Pyruvate, water dikinase (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 923 PF01326: PPDK_N" amino acids 126 to 449 (324 residues), 240.6 bits, see alignment E=2.7e-75 PF00391: PEP-utilizers" amino acids 517 to 585 (69 residues), 38.1 bits, see alignment 1e-13

Best Hits

KEGG orthology group: None (inferred from 100% identity to dvm:DvMF_0708)

Predicted SEED Role

"FIG00606085: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B8DK69 at UniProt or InterPro

Protein Sequence (923 amino acids)

>DvMF_0708 Pyruvate, water dikinase (RefSeq) (Desulfovibrio vulgaris Miyazaki F)
MLHHLLERWRARRAARQAAALDTLKARYHAFRILLENNGRALECLAGFDGTSGTTRRELV
EELVSLTGELVDGLDLLSDGAHPGLFGAYGHIAGRVEQLGADTDPAREGEILCLSLDDLP
PEQAGLAGTKAATLARLRGYGLPVPPGFVVTATAVARLLASPGLEAQLRRLLNVAEADPG
SLAVTTARIREAILAAPMPAEVEQAVRRAWADLAAGLPPEHGPLLLAARSSGTAEDRAEH
SFAGQYATVLGVRTPEALLDALREVAASAFGQRALAYRRHMGLPRGEADMAVLCQAMVPA
RTAGVLFTRDPARSPGSYQADDERMLVVAVPGLGTLAVDGAAPADVYLPARDPAAVRAGD
VETRIARKTLRETLEPDGTLVRRPVPPEDAEAPTLSPPELATLVRLARMVEGVEDGPQDI
EWAVHEATGAVHLLQARPLSMAGARPPSAPHQDGMDGAPLLRGACASPGRAVGRVHLAHR
PREFAPPNGTAATGHNGTGGAGKSGDTGGDAAPHNDAPAVLVLPHSIPDAATHLDGYAAI
MVEAGNPADHLSCVARERAIPMLVGVAGAMNLAEGTGVLVDAGRGAVLEVPDALWDGVLA
ATRREAARRRTPHDRETPGERELRSLVVPLNLTDAYGPTFNERECRSLHDIVRYVHEKAV
LAMFRAGDEVMETAGTLLRRVELGVPFHVLAIDVGGGFRNGAANGGARRNTRGTALQAIP
ENVASVPFAALCEGLTTPGLAWGPPDGGVPAGLLSRALLDGRGERPVGDFNYALVSRDYC
NLNARVEYHFAMLDALCTDNPRENHIRFRFKGGGTGGARRARRIAFMREVLAGAGFFTAA
VDDLLTASLAGEPAGVMRQRLVLLGRLLGYTRLLDAAMTDDETPALFARAFLSGRYDTKD
ARVLRDAAGFNAGHDATVGSGQK