Protein Info for DvMF_0014 in Desulfovibrio vulgaris Miyazaki F

Annotation: hypothetical protein (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 814 PF00391: PEP-utilizers" amino acids 741 to 806 (66 residues), 38.8 bits, see alignment E=6.1e-14

Best Hits

KEGG orthology group: None (inferred from 100% identity to dvm:DvMF_0014)

Predicted SEED Role

"Phosphoenolpyruvate synthase / Pyruvate phosphate dikinase" in subsystem O-Methyl Phosphoramidate Capsule Modification in Campylobacter

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B8DN32 at UniProt or InterPro

Protein Sequence (814 amino acids)

>DvMF_0014 hypothetical protein (RefSeq) (Desulfovibrio vulgaris Miyazaki F)
MSYREETRGGALPFTSKADTLEWLSAYDDLHIPPLRSFRVGEWLTARDATLASLARAFPG
AMLAVRSSCRREDGRESSGAGAFTSVLDVPANDRDALAAAVETVIASYGAPDLSDSPGPA
NPADPDDQVLVQPMVEGIVVSGVMMTRVHADGAPYYVVNYDESGQADAITGGRNASKTVF
VFRDAEDEHWDSRRLRSFIALARRVEALCGHDELDMEFCLDGAGVLHLLQVRPICTQARW
IAGADGQVRAKIGFVVDFISERVGQWPGLFGQRTILGVMPDWNPAEMIGVTPRLLASSLY
RELITRRVWSQAREFMGYRQMPPEELMLMVAGRPFIDVRVSFNSFIPAGLDGVTAETLVG
AWLDRLDTHPQFHDKVEFQVAQTALDFCFDKHLDERYPGLLTRARREDFRAALHGLTARC
LESGRRSSMDWAYEAVTELRNRQAARGRLSADALAQGMKPLPQLVLLAEDCRLFGTLPFS
ILARHAFIAESLLRSTVERGALSPERLAAFKTTIRTVSGEMSHDLMSVCRNGMDRETFLA
RYGHLRPCSYDILSPRYADRDGLFSDSSPVSMVDVDVPFALTPQEYNNIASLLHEAHFGN
TQPEGLLEYARRSIAGRELAKFIFTRNLSDMLELLALWGDRLGLSRDDLSHLEVRDVMEW
ASHSLLRDAPGYFRELADKGRELFNLGRSIKLGYIIRSSRDVYVVPQHRSAPNFIGHGRT
EARLARLYPDSPCSVDIAGRLVCIENADPGFDWIFSRGIAGLVTMFGGTNSHMAIRCAEY
GLPAAIGVGELLFEQVTSAQSALLDAGACTLQPL