Protein Info for Shewana3_3943 in Shewanella sp. ANA-3

Annotation: cell division protein FtsZ (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details TIGR00065: cell division protein FtsZ" amino acids 33 to 344 (312 residues), 302.3 bits, see alignment E=2.8e-94 PF00091: Tubulin" amino acids 38 to 198 (161 residues), 148.2 bits, see alignment E=3.5e-47 PF12327: FtsZ_C" amino acids 247 to 341 (95 residues), 69.8 bits, see alignment E=2e-23

Best Hits

Swiss-Prot: 38% identical to FTSZ_PSEAE: Cell division protein FtsZ (ftsZ) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)

KEGG orthology group: None (inferred from 100% identity to shn:Shewana3_3943)

Predicted SEED Role

"Cell division protein FtsZ (EC 3.4.24.-)" in subsystem Bacterial Cell Division or Bacterial Cytoskeleton (EC 3.4.24.-)

Isozymes

Compare fitness of predicted isozymes for: 3.4.24.-

Use Curated BLAST to search for 3.4.24.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0L292 at UniProt or InterPro

Protein Sequence (400 amino acids)

>Shewana3_3943 cell division protein FtsZ (RefSeq) (Shewanella sp. ANA-3)
MRQAESQLKVSLALPLLTMRVAMFELIHETATGAMPKLTVFGVGGCGCNTINQLSQVNLP
SSVELISVNTDAQAMAATSSHYRIQIGPQTTKGLGAGAKPDVGCAAAIESAQALTEQMQH
SDIVFLTAGLGGGTGTGALPQVAKLARELTKPVIAVVTMPFSFEGQHRKANAEAGLQELL
ESANAVIVLPNDKLAEVLGAKVTLLNAFKESNKILQDVLLGLANTISQAGLINIDLNDFI
SVISRQGRAAMGVSCIQGDEDLISAVKRAMQHPLLDNIELNQAQAAIVSVVAKDTIELSQ
YNQIGATVHEQLPRDALVIIGLTIDPDLESELEIMVIATGIGFAQPEIQAPIQAVNDNYI
NVHNFIKRQAISIADPAPSKFDLENLQIPTYLRQQKPQAH