Protein Info for Shewana3_3740 in Shewanella sp. ANA-3

Annotation: cell division protein FtsA (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 411 TIGR01174: cell division protein FtsA" amino acids 9 to 378 (370 residues), 508.5 bits, see alignment E=5.7e-157 PF02491: SHS2_FTSA" amino acids 85 to 162 (78 residues), 110.6 bits, see alignment E=9.9e-36 PF06723: MreB_Mbl" amino acids 203 to 353 (151 residues), 58.9 bits, see alignment E=9.8e-20 PF14450: FtsA" amino acids 207 to 374 (168 residues), 122.2 bits, see alignment E=4.4e-39

Best Hits

Swiss-Prot: 61% identical to FTSA_ECOL6: Cell division protein FtsA (ftsA) from Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)

KEGG orthology group: K03590, cell division protein FtsA (inferred from 100% identity to sbm:Shew185_0404)

Predicted SEED Role

"Cell division protein FtsA" in subsystem Bacterial Cell Division or Bacterial Cytoskeleton

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0L1N9 at UniProt or InterPro

Protein Sequence (411 amino acids)

>Shewana3_3740 cell division protein FtsA (RefSeq) (Shewanella sp. ANA-3)
MTKNQDRNLIVGLDIGTSKVAVIIGEVLPDGEISIVGLGNHPSRGMDKGGVNDLDSIVRS
VQRALDQAELMADCQVSSVYLSISGKHIACQNENGMVSINDEEVTQEDVDNVIHTARSVK
IPTERRILHVLPQEYAIDVQDGIRSPIGMSGMRMEAKVHIVTCANDMAKNITKSVERCGL
KVDDLVFSGIASADAVLTFDEKDLGVCIVDIGGGTTDIAVYTNGALRHCAVVPVAGNQVT
NDIAKIFRTPSSHAEQIKVQFACARSSMVSREDSIEVPSVGGRPSRSMSRHTLAEVVEPR
YQELFELVLKELKDSGLEDQIAAGIVLTGGTASIQGVVDIAEATFGMPVRVASPLPIKGL
YEYVDQSIYSTGVGLLHYGARRVLERQFERPERQGVTSAWNRVQSWFKGEF