Protein Info for Shewana3_3301 in Shewanella sp. ANA-3

Annotation: peptidase S8 and S53, subtilisin, kexin, sedolisin (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1600 1669 transmembrane" amino acids 1646 to 1663 (18 residues), see Phobius details PF05922: Inhibitor_I9" amino acids 51 to 163 (113 residues), 27.8 bits, see alignment 5.1e-10 PF00082: Peptidase_S8" amino acids 190 to 701 (512 residues), 127.4 bits, see alignment E=1.1e-40 PF02225: PA" amino acids 463 to 561 (99 residues), 27.9 bits, see alignment 3.1e-10

Best Hits

KEGG orthology group: None (inferred from 100% identity to shn:Shewana3_3301)

Predicted SEED Role

"Serine protease, subtilase family"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0L0F6 at UniProt or InterPro

Protein Sequence (1669 amino acids)

>Shewana3_3301 peptidase S8 and S53, subtilisin, kexin, sedolisin (RefSeq) (Shewanella sp. ANA-3)
MSTLFRTGQINEINTQQAKTESTQQGVGVNIQINPQVRKFQYEEGLTGEQVYIVRLNQKP
LAQVSAELLGTDTTQARSSKASKLYVAGQPANRAVQNYRAQLLNTQKQVLADIQSNVGAR
QARQQFTNAVNGFSIAMTQEEAQRVAQLPNVASVRLSKTYELQSDAGPQLIEADKIWTGT
ATPDGLPYKGEGIIMGIIDTGVNTDHRSFAAIGDDGYKHENPWTAGKYVGDCTKVGFESL
CNDKLIGVRSYPIITDNFTNGNYEVTRPAVGEDYQGHGSHTASTAAGNVLLNVDYLAGVS
DTEASDGRVIKAGLFPSISGVAPHANIVSYQVCYPDNHIGAGCPGEALVAGIEDAIKDGV
DVINFSIGGQESNPWASDVELAFLAAREAGISVAVAAGNSGQYNGSAEYFGKIDHASPWL
LSVAATTHDRVIDITTKLVNPVGGSTVPTWTEISGGVINNESVTGHVVMAANHGDQYCAN
KFAADTFVWKDADGNPTDENVIVACRRDSTTSTTGTARSVKADNVKAGGADGMILYNYAA
GEAIVPAVSYSVPSIHITQENWGTSNSGGLYTWLRNGTDQVITITATDIERTLDPSKADW
LAAFSSRGPSTSTPEALIPAVAAPGVDIFAAYADEHPFDTTSPSSDFAMISGTSMASPHV
AGSMALIRQAHKDWTATEVQSALAMTTENKVQYRRLNSSTGDVELASTYRAGTGRINVKN
AINAGFVMDETIDNFKAANPNNGGVLHKLNIPQLVNFECKPKCQWIRTIRATKDGSWSVT
NGDVINWNVDSQKQANQNGVTIKAYPSEFTLKAGETLDIVIEASIMDTQDLFSNAEVELH
SNLIFTESTESAPEAHWPIVFKYDNNNMPSYLRTTAHRNNASAVFKGIDLPEGDSIHGRI
FEPAKATIKTATLPKDDENIYPWDLLQVPAGDDIKNVIDEATHVEMIDVPANSRRLIVEV
LGKMQSPLEGDWNKGNIQIYVGKDYNGNGQPDPLEEIVCVSNDAIYNNFCNINNPDEGTY
WAVFYNPRKGSDSNNFNAGVMETFQYTTTVLSDRVASNMGVEVPASNGTDAVDITVNWDI
PEMSEGDVYYSLVDFGTSAVNAGNIGKVAFKLNRGVDDVSLDTTQTKALVGQTLPFTFEV
QPNDSGADRAFSIEATIPEGLSLKAEDVYSSSSAIVKDIKVEGKKLTISGVQPNTLGDYA
HYNITTNETDPLCRTPNFGNSNPGGYVDLEEFGLLPSYSGFEPTTLGANGKVVTGGTNNI
RYQNGVQIPISTLFSGNTTGYHLYNNADTMNIWNNNSLQILGTGIINLYQNEKIFFPWHD
IFPYNNAPWASIGVLWRAFDYKYTVQDLMSVPLIHGSEVAGITIGSTSDGWGIIEWDNAR
SYGQLSNDPTTNAKRWEERDDRFDFELLFNVNTRFGDGEYELIMAYDNIDYGSQDDRGSI
GLQGFKGALSKLGPDGGYKGEQYAWNNLKDKIRNGLVVCYDYVGPESSQFEVTAWTKVTT
NAPGKALTVDAVSQIDGMANISMSRTVTVPSNITVARIANQTIAENTSLEGLKVVFADEQ
NSVNKITVTGEHISAVVNGNTSGSTITITPEANFHGDVEVTVTVSDVENPADAASTSFML
TVESDGVEPTAPVTPTTPETPAKESSGGALGGLSMLLALGALIRRRKTH