Protein Info for Shewana3_3082 in Shewanella sp. ANA-3

Annotation: putative glycerol-3-phosphate acyltransferase PlsY (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 203 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details transmembrane" amino acids 47 to 66 (20 residues), see Phobius details amino acids 73 to 100 (28 residues), see Phobius details amino acids 112 to 136 (25 residues), see Phobius details amino acids 141 to 159 (19 residues), see Phobius details amino acids 165 to 179 (15 residues), see Phobius details TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase" amino acids 5 to 196 (192 residues), 233.3 bits, see alignment E=1.1e-73 PF02660: G3P_acyltransf" amino acids 13 to 186 (174 residues), 178.6 bits, see alignment E=5.4e-57

Best Hits

Swiss-Prot: 100% identical to PLSY_SHESA: Glycerol-3-phosphate acyltransferase (plsY) from Shewanella sp. (strain ANA-3)

KEGG orthology group: K08591, glycerol-3-phosphate acyltransferase PlsY [EC: 2.3.1.15] (inferred from 99% identity to she:Shewmr4_2903)

Predicted SEED Role

"Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY" in subsystem Glycerolipid and Glycerophospholipid Metabolism in Bacteria

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.3.1.15

Use Curated BLAST to search for 2.3.1.15

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0KZT7 at UniProt or InterPro

Protein Sequence (203 amino acids)

>Shewana3_3082 putative glycerol-3-phosphate acyltransferase PlsY (RefSeq) (Shewanella sp. ANA-3)
MSQLTLTLLMIVAAYLAGSVSSAVLVCRMRGLPDPRLQGSGNPGATNVLRIGGASSAAMV
LFFDMLKGALPTYLAYLMGIDAISLGLIAIAACLGHIYPIFFGFKGGKGVATAFGAMAPI
GDDLAICLMASWVVLVLISRYSSLAAIITALLAPLYTWWLDDRFTIPVAMLSTLIIIRHK
ENIQRLLKGEESKVSRKKRPKAP