Protein Info for Shewana3_2962 in Shewanella sp. ANA-3

Annotation: filamentation induced by cAMP protein Fic (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 375 PF13784: Fic_N" amino acids 32 to 111 (80 residues), 90.9 bits, see alignment E=6.7e-30 PF02661: Fic" amino acids 143 to 217 (75 residues), 59.5 bits, see alignment E=7.4e-20 PF21248: SoFic-like_C" amino acids 282 to 357 (76 residues), 128.8 bits, see alignment E=1.1e-41

Best Hits

Swiss-Prot: 73% identical to SOFIC_SHEON: Protein adenylyltransferase SoFic (fic) from Shewanella oneidensis (strain MR-1)

KEGG orthology group: None (inferred from 100% identity to shn:Shewana3_2962)

Predicted SEED Role

"MloA"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0KZG9 at UniProt or InterPro

Protein Sequence (375 amino acids)

>Shewana3_2962 filamentation induced by cAMP protein Fic (RefSeq) (Shewanella sp. ANA-3)
MDLNMTWYPDQPHNALPVLPPALESIETRAVLKACIPARAALAELKQAGELLPNQGLLIN
LLPLLEAKDSSEIENIVTTTDKLFQYSQEDTGADPATKEALRYRSALNQGFHQLSQRPLC
VTTAIEICSTLKDTDMEIRRIPGTTISNQTTGEVIYTPPAGEAVIRDLLSNWEKFIHTED
DIDPLVKMAIAHYQFEAIHPFYDGNGRSGRILNVLFLIEQQLLTLPILYLSRYIVQHKAD
YYRLLNQVTREGDWQSWLLFMLKGVEQMASWTCGKIAAVRELMEQTSEYVRTALPKIYSH
ELVQVIFEQPYCRIGNLVERDIAKRQTASVYLKQLADIGVLEELTIGKEKLFVHPKLMQL
MTRDSNQIKPYTMAE