Protein Info for Shewana3_1995 in Shewanella sp. ANA-3

Annotation: hypothetical protein (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 685 transmembrane" amino acids 33 to 51 (19 residues), see Phobius details PF05787: PhoX" amino acids 80 to 648 (569 residues), 478.6 bits, see alignment E=1.7e-147

Best Hits

KEGG orthology group: K07093, (no description) (inferred from 100% identity to shn:Shewana3_1995)

Predicted SEED Role

"Predicted phosphatase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0KWQ7 at UniProt or InterPro

Protein Sequence (685 amino acids)

>Shewana3_1995 hypothetical protein (RefSeq) (Shewanella sp. ANA-3)
MSKATFDPTLYNKSNNEPFNQVLDKHLSRRNFVKSGLGLGAMTAFAGMGLVGCGSDNSPA
PTPIDPVPPLPPTQSSAKLSFTSVAGSRLDAVVVPEGYSAQVLAPWGTPLNAKAAPWKAD
GSNTADDQANSVGMHHDGMHFFPLNDAGDDGLLCINHEYIDEIALHPNGPTVDETTGLRT
IIDEIRKEINAHGVSVVRIKLVNNQWEVVYNDSHNRRFTGATVMDIAGPLAYSPLLETRY
SPDGSQARGTLNNCGNGYTPWGTYLTCEENWPGYFANRGTLAADQARIGISKSSTRYGWD
DLAGHAEERLDEFARFDVTPKGNSAQDDYRNEANGHGYIVEIDPYNPSSRAIKRTALGRF
RHEGCTFGKLTEGKPVVFYSGHDSQFEYLYKFVSNALWDPQDANSTNRLQMGDKYMNEGT
LYAAKFNENGAGIWLPLILDSQTTDGKTLGDSFASLAEIILNTAGAADLVGATPMDRPEW
CAVDPFTGSAYLTLTNNSKRTEANPANPRLKNSFGHIIRWDEGDKDTEFTWDIFVFGSPS
DGNAETNLSGLTDLNQFASPDGLAFDARGILWVQTDNGAKEVAEETNDQMLAIVPSTLVD
SANKQASVTAENQMELKRFFVGPNDCEVTGFAISPDYTSVFANIQHPGNWPYSNNAAEIT
PAGTVLRPRAATVVIRKLDGKEVAV