Protein Info for Shewana3_1812 in Shewanella sp. ANA-3

Annotation: ATPase (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 509 PF20030: bpMoxR" amino acids 15 to 197 (183 residues), 203.7 bits, see alignment E=3.4e-64 PF01078: Mg_chelatase" amino acids 32 to 77 (46 residues), 25.5 bits, see alignment 1.6e-09 PF07728: AAA_5" amino acids 46 to 174 (129 residues), 96.8 bits, see alignment E=2.4e-31 PF17868: AAA_lid_8" amino acids 228 to 293 (66 residues), 69.2 bits, see alignment E=4.4e-23

Best Hits

KEGG orthology group: K03924, MoxR-like ATPase [EC: 3.6.3.-] (inferred from 100% identity to shn:Shewana3_1812)

Predicted SEED Role

"Putative 2-component regulator"

Isozymes

Compare fitness of predicted isozymes for: 3.6.3.-

Use Curated BLAST to search for 3.6.3.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0KW76 at UniProt or InterPro

Protein Sequence (509 amino acids)

>Shewana3_1812 ATPase (RefSeq) (Shewanella sp. ANA-3)
MTQLTAIQPLSRKDKISQLMAAMNVGLLERKEQIKLILLAALAGEHVLLVGPPGTAKSEL
AKRLKNIFVEASYFERLLTRFSVPEEVFGPLSIRALEDDRYARLTSGYLPDASVAFIDEI
FKANSAILNSLLTILNEREFDNGNRRYKVPLISVIAASNELPEGEELSALYDRFMLRSFV
GPVSDSSFSELLQLSAEKFEPELNIRLKLEDLADVQQLADKVTLSSSVLALCKEFRAYLN
RENIYVSDRRWLKLIKLMKVSAFTSGLTQVSNYDAWVLPHCLWNKPEEFSGLQELYNQAV
AINGDFTDERASSLVATWEGRLKADKSQQKQKVDNKSRPLFINDKGKQTLQSSGEVQKTN
AKGEVLYWDDYDNKETTSSRGRYSSSLNAIMINQAFKPVMESISYSEDHIKGRVAGVEEI
LAKIKNHINALSKQREDAKTVFESHLWLNPELLSKVIASLDNALEYSHKLSNRLVKVKQG
FEALPREQEVDLSDTSIPVDAVLEGELCE