Protein Info for Shewana3_1690 in Shewanella sp. ANA-3

Annotation: protease domain-containing protein (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details transmembrane" amino acids 1279 to 1295 (17 residues), see Phobius details PF05922: Inhibitor_I9" amino acids 140 to 189 (50 residues), 29.1 bits, see alignment (E = 3.2e-10) PF00082: Peptidase_S8" amino acids 216 to 691 (476 residues), 140.4 bits, see alignment E=1.9e-44 PF02225: PA" amino acids 496 to 573 (78 residues), 53.6 bits, see alignment 5.1e-18 PF17766: fn3_6" amino acids 745 to 837 (93 residues), 35.8 bits, see alignment 1.9e-12 PF04151: PPC" amino acids 907 to 977 (71 residues), 31.6 bits, see alignment 6.3e-11 TIGR03501: GlyGly-CTERM domain" amino acids 1279 to 1298 (20 residues), 25.8 bits, see alignment (E = 5.9e-10)

Best Hits

KEGG orthology group: None (inferred from 100% identity to shn:Shewana3_1690)

Predicted SEED Role

"serine protease, subtilase family"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0KVV4 at UniProt or InterPro

Protein Sequence (1300 amino acids)

>Shewana3_1690 protease domain-containing protein (RefSeq) (Shewanella sp. ANA-3)
MKTKIALAVSMALLSAAANAQTVLSPTGETLQLDIPAELSNDSTRGQLTAVNNQDVKFIP
EPDLAEGEYTYIVRLRDSAVANYQGDIPGFKATSPQHVQPTSQAKSTGKTGNVKLNAAAP
EVKNYVSFLKVKQERFLTSASAAIGSRLEPLTTYQYAINGVAVRMTQAQAIKLAELPEVV
YIEREKVEQLETDVSQALIGSPKVWDGSATGTKAMGEGVIVAIIDSGINSDHASFADVGE
DGYDHTNPLGQGIYVGDCKTDFASMCNDKLIGVRSYPEITDVYDDEKVFGATPPAKNGED
YGGHGSHVASTAAGNILLNVPYVEGEVGKLEGSGIPTGLTFAQMSGVAPHANIIAYQVCK
PGDQEDTYNGCSTAPILKAIDDAIKDGVDVINFSISGGGNPWNSATEQGFLAVRNAGIFA
AVAAGNTRANIAQVPYSSSKNAPWYTSVANSTHNREVVRELEFNGKTFEFTPGSGPVQTD
VVKGLPVFAGAVDATNVEGCKVFPADAFKDKIAVIKRGSCDFATKVSGALTAGAKAVIVY
NRDGEGNARLTMSALEKLNVPAVFIGNTDGVALLEAMAANPAVELTLTPTPQAISREADV
LSASSLIGPNATNDVIVPSVAAPGTDIYAAYADQQFGHDKSGTNPADFTLMSGTSMASPH
VAGAGSLLKSLHKDWTPDNIRSALMLTATTAQAMKKADAKTVADPFDVGAGRIRVDLAAK
TGLVMDESALNYEIANPVVNGDPRKLNVPSMADSRCVNTCTWTRTVTATQDGSWTAKGQA
VTDKLALTVSPESFTLKKGASQTITVTADVTQVGADWGFGNLVLESASFPTATMPIAAKI
GKRNLPNLVNIEATRNADEINLEGLKAVDFASVGAEVTGLKLSQTIESSVKQDSNNASYT
DDLADGVKVFKFDVNENALFFRTSISYTTSPDLDMYVLLDKNDGSKLVRVGSSAKDGSEE
SVLLNNPVKGSYYVIVQNYSASSATADDVFGLKQLTFYNNETAADNLTATLSGDTKDFDV
KLAWKDALKVGDDGLAMLTLTTGDDKVAPVKLPVIFERVGDDVLSPLGNALSGQLTPGVA
KVMKTRIEANRTQETRVYNLEAMLPEGHEVANISHDGKQDGNKITWTVEMPSGADAKDIS
FELVPRKASVDNQLSLTNKVNNASSETLTQSYQFDVSEVAPVAKVEAPTTVQEGKPLFID
ASKSSDANNDPLTYKWTQLGGTSFNFDPTAAKLNLVAPSVNGAAQTVSFQLTVSDNHGNS
DSSLVSVSITDTPPKKDDGGALGWLSLLLLPFAFGRRKQR