Protein Info for Shewana3_1471 in Shewanella sp. ANA-3

Annotation: ATP-NAD/AcoX kinase (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 380 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details PF01513: NAD_kinase" amino acids 7 to 169 (163 residues), 70.8 bits, see alignment E=2.1e-23 PF00781: DAGK_cat" amino acids 84 to 143 (60 residues), 22.3 bits, see alignment E=1.2e-08 PF20143: NAD_kinase_C" amino acids 235 to 370 (136 residues), 59.2 bits, see alignment E=5.5e-20

Best Hits

KEGG orthology group: None (inferred from 100% identity to shn:Shewana3_1471)

Predicted SEED Role

"ATP-NAD kinase (EC 2.7.1.23)" (EC 2.7.1.23)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.7.1.23

Use Curated BLAST to search for 2.7.1.23

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0KV86 at UniProt or InterPro

Protein Sequence (380 amino acids)

>Shewana3_1471 ATP-NAD/AcoX kinase (RefSeq) (Shewanella sp. ANA-3)
MIRFRLGLVINPLAGLGGSVGLKGSDGVAEQALALGAEPKAIKRMMQALEVIVPFANDIE
IITASGVMGEDAANALGFNSRVVYQTPEKTQAVDTQAVVRTLLNEPLDLLLFAGGDGTAR
DVYSVFEQAVIDDKLPVLGVPAGVKIHSGVYGITPHAAGMVVKMLLEGELVSLMSADVMD
IDEVAFRQGTVRAKRFGELLVPAEPRYVQAVKMGGKEVDELVLADIAADVIQQMEDELYI
MGSGSTVAFVMEELGLDNTLLGVDLIQDKILVASDLTAKQLLDFTQDKPAKLVITLIGGQ
GHILGRGNQQLSPELIRRLGKDNIIILATKTKLKALEGRPLIVDSGDPQLDRELCGYYKV
TTGYHDYVMYQVANPDYSDL