Protein Info for Shewana3_1308 in Shewanella sp. ANA-3

Annotation: GCN5-related N-acetyltransferase (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 525 TIGR03590: UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase" amino acids 14 to 312 (299 residues), 300.9 bits, see alignment E=5.2e-94 PF13302: Acetyltransf_3" amino acids 367 to 501 (135 residues), 36 bits, see alignment E=1.6e-12 PF00583: Acetyltransf_1" amino acids 401 to 501 (101 residues), 33.9 bits, see alignment E=5.2e-12 PF13420: Acetyltransf_4" amino acids 412 to 503 (92 residues), 33.7 bits, see alignment E=5.4e-12

Best Hits

KEGG orthology group: None (inferred from 100% identity to shn:Shewana3_1308)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0KUS3 at UniProt or InterPro

Protein Sequence (525 amino acids)

>Shewana3_1308 GCN5-related N-acetyltransferase (RefSeq) (Shewanella sp. ANA-3)
MVDNLQAALSDSQTVVFRTDSSRSIGYGHVMRCLTLAMALKQQGCQCYFICRDLLNNHSA
LVEQHGFVLVLLPRDTYLSPENDTSEPRHCSLLETSWQHDISQCVSHFNVIKPDIIVVDH
YALDEKWETQAKAYCKKLMVIDDLADRMHRCDILLDYNLSVKSNAYKTWVPQKCQLLLGG
KYVLLRDEFKQWQYLSIQRRISKRLETILVTFGGIDSDNNSEKVLQVIKDTPLLALKRID
VVVSANAPHLSSLQSAAQAMQIETHIHTNVNNMAELMAVADLAIGSGGGCTYERLFMKLP
SLLMPIADNQVTPLLSMSQLGLFELFLNFNELSIKLGRYCSHPLPLVAAPVLFGAPLVCQ
NLLAKEVTLADVKPLDIRRTFHWLQDVTLRGQFVQTKAPVKASHFIYWRALLKDQTQYTF
SILQQGRHVGNLGIKHLNVQRSEAELWIYIGVQTEQNKGLGTIALTLLENIIKHTLLINN
IVIHVAKDNSPALSFYNKLGYVICDDKLIAAEFSEKNVLQMRKVL