Protein Info for Shewana3_4368 in Shewanella sp. ANA-3
Annotation: chromosome segregation ATPases-like protein (RefSeq)
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
KEGG orthology group: None (inferred from 100% identity to shn:Shewana3_4368)Predicted SEED Role
"Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)" in subsystem Bacterial Cell Division or Two cell division clusters relating to chromosome partitioning or Universal GTPases (TC 3.A.5.1.1)
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Compare to protein structures
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0L3F0 at UniProt or InterPro
Protein Sequence (351 amino acids)
>Shewana3_4368 chromosome segregation ATPases-like protein (RefSeq) (Shewanella sp. ANA-3) MARAGITYYDVSKAAEAIKIQNQEPTVDRVREHLGTGSKSTIAPLLKRWRSDNGEVVDVS GLPNDLVEVVKALHERVQQMADQRIAQSRDEFKASNDQLRKELTEARNSIAQLTDRQQDL NAQLSQITEAKALQSKSLEDVRIKLATAEAQRDEALSRTAELKESVAELKQENKDIRDHF EHYQQRTAEDRQQEREQFHVVNQGLKDLIQDLQHRLIQAESSASELIDTNAHLQRQTHEL EQANAMNKSTLDRQVVDIENLEHRLNDASAKSREQQHKSEQLADNIAALTSQKADADKQV AVLSQALEATKTDLIVSQNRVEALSDENRLILQEKAVIQGQFKQLQDSLSR