Protein Info for Sama_3507 in Shewanella amazonensis SB2B

Annotation: sulfatase (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 646 signal peptide" amino acids 1 to 43 (43 residues), see Phobius details transmembrane" amino acids 58 to 77 (20 residues), see Phobius details amino acids 84 to 103 (20 residues), see Phobius details amino acids 144 to 162 (19 residues), see Phobius details amino acids 174 to 192 (19 residues), see Phobius details PF00884: Sulfatase" amino acids 285 to 555 (271 residues), 171.7 bits, see alignment E=1.2e-54

Best Hits

Swiss-Prot: 56% identical to Y1246_HAEIN: Uncharacterized protein HI_1246 (HI_1246) from Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

KEGG orthology group: None (inferred from 100% identity to saz:Sama_3507)

Predicted SEED Role

"Phosphoglycerol transferase I (EC 2.7.8.20)" (EC 2.7.8.20)

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.8.20

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A1SBF3 at UniProt or InterPro

Protein Sequence (646 amino acids)

>Sama_3507 sulfatase (RefSeq) (Shewanella amazonensis SB2B)
MRSTKPPQSIWRMIAIFGLLAMVALTASRIGLGLWQSDRVAAAEGWTHMLLQGARVDIAT
LCWLWGIAALGTVIFAGNHAIGRVWLVLLRGWLVLGLWLMLFLELSTPSFIEEYGIRPNR
LYVEYLIYPKEVLSMLWSGRPMELVFGLLASTGILWGGWRLSGRLSTHLVYPRWYWRPVF
ALLVIIVTLMGARSTLGHRPLNPAMVAFCDDPLVNSLTVNSAYSLVFAMTQMGQEENAAK
MYGQLTDEEIIAAIREDSGRSAERFVSDLLPSLSDNPASYQGKPRNLVIILQESLGARFV
GSLGGLPLTPNLDALSQEGWYFDNLFATGTRSVRGIEAVTTGFTPTPARAVVKLGKSQQG
FFTIADFLRRQGYDTSFIYGGESHFDNMRSFFLGNGFGRIVDQDDYQNPAFVGSWGVSDE
DLMRRADSEFKRLHQQGTPFFSLVFSSSNHDPFEFPDDRIELYEQPKQTRNNAAKYADFA
IGEFFKLAKNADYWQDTVFLVVADHDSRVGGANLVPVNRFRIPGLIIADGVAPKRDQRVV
SQIDLAPTLLSLIGVSGRYPMLGKDLTRTPDNWPGRALMQYDKNFAYMRGQDLVILQPER
DPEGFTYQPEDGSLLPSPQPKSMQKTALAWALWGSLAYQKGLFRQE