Protein Info for Sama_1760 in Shewanella amazonensis SB2B

Annotation: acetyltransferase (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 911 PF02629: CoA_binding" amino acids 11 to 103 (93 residues), 35.8 bits, see alignment E=4.1e-12 PF13380: CoA_binding_2" amino acids 14 to 140 (127 residues), 82.6 bits, see alignment E=1e-26 PF13607: Succ_CoA_lig" amino acids 156 to 292 (137 residues), 179.8 bits, see alignment E=8.2e-57 PF13549: ATP-grasp_5" amino acids 487 to 708 (222 residues), 255.2 bits, see alignment E=1.5e-79 PF13302: Acetyltransf_3" amino acids 740 to 879 (140 residues), 30.8 bits, see alignment E=1.5e-10 PF00583: Acetyltransf_1" amino acids 786 to 878 (93 residues), 35.5 bits, see alignment E=3.7e-12

Best Hits

Swiss-Prot: 52% identical to LYSAC_ECOLI: Peptidyl-lysine N-acetyltransferase PatZ (patZ) from Escherichia coli (strain K12)

KEGG orthology group: K09181, hypothetical protein (inferred from 100% identity to saz:Sama_1760)

MetaCyc: 52% identical to peptidyl-lysine N-acetyltransferase (Escherichia coli K-12 substr. MG1655)
2.3.1.-

Predicted SEED Role

"Protein acetyltransferase" in subsystem Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A1S6F9 at UniProt or InterPro

Protein Sequence (911 amino acids)

>Sama_1760 acetyltransferase (RefSeq) (Shewanella amazonensis SB2B)
MSQRTLNTLFKPSSIAIIGASNGPRRAGNVVMKNLLAGGFSGPIMPVTPKYQAVMGVLAY
PSIEALPIKPDLAIICTRASRVPGIVETLAQFGCKVAIIMASGMANEMDGEGQSLLATTL
ANAKRYGMRILGPNSLGMMLPNLGLNASLAHTSAQPGKIAFVSQSAAVCTTVLDWANNKG
IGFSSFISLGDATDIDFDELLDFLGRDGRTSAIMLYMDAINEKRHFLSAARAAARNKPIL
VIKSGRSQEGARAAKLHTGGVSGSDAVYEAAFRRAGMLRVNDLVEMFAALESLNHGNDLK
GERLGIISNGGGPAVLAVDELISRGGKLAELSEDTCRKLDTVLPKTWSAQNPIDIIGDAD
AKRYVDALNILMDSDDADAILVLHSPSALGESELIAEAVADAIKKHPHRSKLNILTNWSG
ENSAYKARKRFTKAGVATYRTPEGAVGAFMHMVEYRRNQKLLQEVPQSITDKVPHDAGKA
REVMQAALAKGKTVLETYDASAILGAYGLNTIDTWFAKDAAEAADIAEQVGYPIALKIQS
PDILHKSDVYGVTLNLTSADEIHHAAMAMMQRVHQSNPEAKIEGLIVQRMALTAGAQELR
LAVISDPVFGPAICLGEGGSEWQPTRDAAVALPPLNMALARYMVIQALKTGKLRDRHLPQ
GLDMHALCLMLTQLSHLVIDCPQIQALDLNPVLAAGDKITLLDINLRLDPQCSDNTNRLA
IMPYPKELEEQAVLRNGIQVMLRPILPEDEPKHLAFDNSLTDEDRYKRYFGARQRMTHEE
MAVLTQIDYAREMAFIATAQDANGEDYTLGAVRASIDPDNTEAEFAMAVRSDHQGLGLGK
LLLEKLIRYYQANETQVLTGFTMIENRNMANLARTLGFTVTFDMEEHLIKMHMDLKAISP
KNGVDNDLHAT