Gene info for Dv5SB in Desulfovibrio vulgaris Hildenborough JW710

Name: rrf
Annotation: 5S ribosomal RNA (VIMSS-AUTO)
Type 4: 5S ribosomal RNA
Located on scaffold 1944, + strand, nucleotides 299,866 to 299,982
See nucleotide sequence around Dv5SB or for all of scaffold 1944

Other databases: MicrobesOnline

Nearby Genes

500 ntDVU0256 and rrsB are separated by 510 nucleotidesrrsB and tRNA-Ile are separated by 73 nucleotidestRNA-Ile and tRNA-Ala are separated by 22 nucleotidestRNA-Ala and rrl are separated by 152 nucleotidesrrl and rrf are separated by 107 nucleotidesrrf and DVU0257 are separated by 839 nucleotidesDVU0257 and DVU0258 are separated by 160 nucleotidesDVU0258 and DORF4170 are separated by 31 nucleotidesDORF4170 and divK are separated by 100 nucleotidesdivK and mtrA are separated by 17 nucleotides DVU0256: DVU0256 - ATP-dependent RNA helicase, DEAD/DEAH box family (TIGR), at 291,021 to 294,386 DVU0256 Dv16SB: rrsB - 16S ribosomal RNA (RefSeq), at 294,897 to 296,437 rrsB DVU_tRNA-Ile-2: tRNA-Ile - tRNA with anticodon GAT for Ile (VIMSS-AUTO), at 296,511 to 296,587 tRNA-Ile DVU_tRNA-Ala-4: tRNA-Ala - tRNA with anticodon TGC for Ala (VIMSS-AUTO), at 296,610 to 296,685 tRNA-Ala Dv23SB: rrl - 23S ribosomal RNA (VIMSS-AUTO), at 296,838 to 299,758 rrl Dv5SB: rrf - 5S ribosomal RNA (VIMSS-AUTO), at 299,866 to 299,982 rrf DVU0257: DVU0257 - acetyltransferase, GNAT family (TIGR), at 300,822 to 301,286 DVU0257 DVU0258: DVU0258 - sensory box histidine kinase/response regulator (TIGR), at 301,447 to 303,420 DVU0258 DORF4170: DORF4170 - no description, at 303,452 to 303,580 DORF4170 DVU0259: divK - DNA-binding response regulator (TIGR), at 303,681 to 304,070 divK DVU0260: mtrA - response regulator (TIGR), at 304,088 to 304,489 mtrA
Locus Name Description Strand Phenotype
DVU0256 DVU0256 ATP-dependent RNA helicase, DEAD/DEAH box family (TIGR) - insig.
Dv16SB rrsB 16S ribosomal RNA (RefSeq) + no data
DVU_tRNA-Ile-2 tRNA-Ile tRNA with anticodon GAT for Ile (VIMSS-AUTO) + no data
DVU_tRNA-Ala-4 tRNA-Ala tRNA with anticodon TGC for Ala (VIMSS-AUTO) + no data
Dv23SB rrl 23S ribosomal RNA (VIMSS-AUTO) + no data
Dv5SB rrf 5S ribosomal RNA (VIMSS-AUTO) + no data
DVU0257 DVU0257 acetyltransferase, GNAT family (TIGR) + insig.
DVU0258 DVU0258 sensory box histidine kinase/response regulator (TIGR) - strong
DORF4170 DORF4170 no description - insig.
DVU0259 divK DNA-binding response regulator (TIGR) - strong
DVU0260 mtrA response regulator (TIGR) - insig.

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