Protein Info for DVU2022 in Desulfovibrio vulgaris Hildenborough JW710

Annotation: conserved hypothetical protein (TIGR)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1158 PF20473: MmeI_Mtase" amino acids 285 to 353 (69 residues), 32.1 bits, see alignment 1e-11 PF07669: Eco57I" amino acids 458 to 546 (89 residues), 31.9 bits, see alignment 2.4e-11

Best Hits

KEGG orthology group: None (inferred from 100% identity to dvu:DVU2022)

Predicted SEED Role

"putative type II restriction enzyme methylase subunit"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q72AH3 at UniProt or InterPro

Protein Sequence (1158 amino acids)

>DVU2022 conserved hypothetical protein (TIGR) (Desulfovibrio vulgaris Hildenborough JW710)
METAKLKKFAQFARRSLLEQVSAKLKLVLAENSAARRECADAVKKLEEAIKGRGKEQVID
RVAYIWFNRFCALRFMDVNRYTRIGVVSPAEGQFQPEILAEAKMGHIDEEMVSGKVRQQI
FALLDGKAPSRDPQGEAYRLLVVAACNFWNKAMPFLFQRIDDYTELLMPDDLLSGNSILA
YTREAMTPDACEDVEVIGWLYQFYISEKKDEVFDGLKKNKKITPENIPAATQLFTPHWIV
RYLVENSLGRLWLLNRPGSKLVEQMDYYIKPEQAETDFLRIAKPEEIKICDPACGSGHML
TYAFDLLYAIYEEEGYEPAEIPEKILTNNLYGIEIDERAGELAAFALTMKARSKQRRFFN
KGVKPNICVLENVHFDGNELKDYMDFVGRDLFTAPLQTTLRQFEEADNFGSLIRPDVTDV
DGMLRILESKNVSGQLFISMTHQKVLQALRQADYLSPKYHVVIANPPYMGKRSMNGRLQV
LAKDSYQRSKTDLFAMFIERNVDLAKDSAYVAMITMQSWMFLSTFENLRSNILSNSSIVS
MAHLGARAFDSIGGEVVSTTAFICKNIADREYKGTYLRLVDGEDEQEKSNQLKELKGRPY
LASSDDFDTIPGRPIAYWISEKVRNAFAQGTPFGDVGFPKVGMQTSNNDKYLRLWPEVSF
HEFKDEEMPPKWIKYLKGGAFRRWYGNLDYLLRYNKNPQFIKQQPNATVLPETKLKEAKC
TWTDLTSGPFNARYAPDDTFHDISGHCFYPPRNKQMVLLAYSNTRLFDYLLSLINASFHF
QVGDVAKIPVLEVDPSASNNASTLVSLSKNDWDSYETSWDFTSLPVLNPDYRQPTLKTTY
QKLRAHWREMTLEMQRLEEENNRTFIDAYGLQDELKPEVPLNEITLTCNPHYRYGNDKSE
DELEALLLADTMRELVSYAVGCMFGRYALDKPGLILANQGETIEDYLKRVPEPSFPADDD
NVIPMLDGDWFTDDIAERFRKFLRVAFGEEHYEANLRFVEQALNIKGKRNYSIRDYFLGE
FYTDHVKRYKKRPIYWLFSSPKGSFNALIYMHRYRPDTASVVLNDYLREFRTKLTSHKNH
LEAVSISASSSQGEKTKALKEIEKITKMIAEMEEYEREVLYPLATEQVEIDLDDGVKVNY
PKLGSALKKIPGLDAKED