Protein Info for Dshi_2045 in Dinoroseobacter shibae DFL-12
Annotation: thiamine pyrophosphate protein central region (RefSeq)
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 79% identical to XSC_ROSNI: Sulfoacetaldehyde acetyltransferase (xsc) from Roseovarius nubinhibens (strain ATCC BAA-591 / DSM 15170 / ISM)
KEGG orthology group: None (inferred from 100% identity to dsh:Dshi_2045)MetaCyc: 79% identical to sulfoacetaldehyde acetyltransferase (Roseovarius nubinhibens ISM)
Sulfoacetaldehyde acetyltransferase. [EC: 2.3.3.15]
Predicted SEED Role
"Sulfoacetaldehyde acetyltransferase (EC 2.3.3.15)" (EC 2.3.3.15)
MetaCyc Pathways
- sulfoacetaldehyde degradation I (2/2 steps found)
- superpathway of sulfolactate degradation (4/6 steps found)
- sulfolactate degradation II (2/4 steps found)
- superpathway of taurine degradation (3/6 steps found)
KEGG Metabolic Maps
Isozymes
Compare fitness of predicted isozymes for: 2.3.3.15
Use Curated BLAST to search for 2.3.3.15
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Compare to protein structures
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A8LPS9 at UniProt or InterPro
Protein Sequence (592 amino acids)
>Dshi_2045 thiamine pyrophosphate protein central region (RefSeq) (Dinoroseobacter shibae DFL-12) MRMTTEEAFIKVLQRHGVDHAFGIIGSAMMPISDLFPEAGITFWDCAHEGSAGMMADGFT RASGRMSMMIAQNGPGITNFVTAVKTAYWNHTPLLLVTPQAANKTIGQGGFQEVAQMKLF EDMVAYQEEVRDPSRMAEVLTRVISKAKTLSGPAQINIPRDFWTQVIDIEIPEPIEFERS PGGEASVARAAALLSEAKNPVILNGAGVVLSEGGIAASKALAERLDAPVCVGYQHNDAFP GGHPLFAGPLGYNGSKAAMELISEADVVLALGTRLNPFSTLPGYGMEYWPADAKIIQVDI NSDRIGLTKKISVGIVGDAAKVARGILGQLAEDAGDAGRQERRDRIAQVKSRWAQQLSAM DHEEDDPGTTWNARARAAKPDWMSPRMAWRAITAALPRDAIISSDIGNNCAIGNAYPDFD APRKYLAPGLFGPCGYGLPAIVGAKIAQPDTPVVGFAGDGAFGIAVNELTAIGRGDWPAI TQVVFRNYQWGAEKRNSTLWFDDNFVGTELDEEVSYAGIARACGLDGVVVRTMQELTDTL ATAIKAQMTEGKTTLIEVLLNQELGEPFRRDAMKKPNKVAGVSKQDMMVEAG