Protein Info for Dshi_1761 in Dinoroseobacter shibae DFL-12

Annotation: phospholipid/glycerol acyltransferase (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 292 PF19576: Acyltransf_2" amino acids 70 to 272 (203 residues), 44.7 bits, see alignment E=8.1e-16 PF01553: Acyltransferase" amino acids 75 to 202 (128 residues), 35.4 bits, see alignment E=8.7e-13

Best Hits

KEGG orthology group: None (inferred from 100% identity to dsh:Dshi_1761)

Predicted SEED Role

"Acyltransferase domain protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A8LMF8 at UniProt or InterPro

Protein Sequence (292 amino acids)

>Dshi_1761 phospholipid/glycerol acyltransferase (RefSeq) (Dinoroseobacter shibae DFL-12)
MSQARHVAREISYASSASSRAGRALIRVTENATGRLKLIRQAAGYEQEVAAGRNFWDVMA
DRYGLSLEASGGTLDLIPREGPVVVIANHPYGILDGLMLGKILSARRDEYRILAHQVFRK
AEDLEKIILPISFDDTKQAVALNIETRKEALRFLAGGGAIGIFPGGTVSTSATPFGHPMD
PGWRSFTARMIAKSGATVVPIFFEGHNSRMFQLASHLHATLRMALLIKEFKARVGAPVRV
VIGSPLAPETLDPFRNDPKGMMDFLRQETYRLSPTPLPDYGYGFEFEDRHRI