Protein Info for Dshi_1016 in Dinoroseobacter shibae DFL-12

Annotation: PhoH family protein (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 337 PF02562: PhoH" amino acids 129 to 332 (204 residues), 310.3 bits, see alignment E=8.1e-97 PF13604: AAA_30" amino acids 134 to 285 (152 residues), 34.5 bits, see alignment E=2.8e-12 PF13245: AAA_19" amino acids 136 to 285 (150 residues), 29.3 bits, see alignment E=1.3e-10

Best Hits

KEGG orthology group: K06217, phosphate starvation-inducible protein PhoH and related proteins (inferred from 100% identity to dsh:Dshi_1016)

Predicted SEED Role

"Phosphate starvation-inducible protein PhoH, predicted ATPase" in subsystem Phosphate metabolism

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A8LSE4 at UniProt or InterPro

Protein Sequence (337 amino acids)

>Dshi_1016 PhoH family protein (RefSeq) (Dinoroseobacter shibae DFL-12)
MALSATTPPATQPPTPERLIEFPDNRVLIDLCGEYDRNLAQIEHQLGVQILRRGNQLAVF
GDADAQVQAEGVLHALYQRVESGKSSEPGDIDGLIRLGVPEDDATPEAGDQMELFKGGTV
ELKTRKKSVEPRTEMQKAYVQSLFANELAFGIGPAGTGKTYLAVAVGVTMFLGGHVDKII
LSRPAVEAGERLGFLPGDMKDKVDPYMQPLYDALNDFLPGKQVAKLIEEKRIEIAPLAFM
RGRTLSNAFVVLDEAQNATTMQMKMFLTRLGQGSRMVITGDRSQVDLPRGVTSGLRDAER
ILRDVKGVSFTYFTAKDVVRHPLVARIIEAYDADDPT