Protein Info for Dshi_0754 in Dinoroseobacter shibae DFL-12

Annotation: Methyltransferase type 11 (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 198 PF03848: TehB" amino acids 22 to 80 (59 residues), 21.8 bits, see alignment E=2.3e-08 PF13847: Methyltransf_31" amino acids 32 to 131 (100 residues), 31.4 bits, see alignment E=3.2e-11 PF13649: Methyltransf_25" amino acids 34 to 127 (94 residues), 55.8 bits, see alignment E=1.3e-18 PF08241: Methyltransf_11" amino acids 37 to 130 (94 residues), 40.5 bits, see alignment E=7.3e-14

Best Hits

KEGG orthology group: None (inferred from 100% identity to dsh:Dshi_0754)

Predicted SEED Role

"FIG00988297: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A8LQV6 at UniProt or InterPro

Protein Sequence (198 amino acids)

>Dshi_0754 Methyltransferase type 11 (RefSeq) (Dinoroseobacter shibae DFL-12)
MWNARYDRPDYLFGRDPAAFLVAQAGHIPDASRVLVVADGEGRNSVHLAGLGHEVTAFDA
APNAVDKARKLAAEKGVAVDFHEADIFAWDWAAAPVDAVVAIFIQFMGPGPRAEVFAGLD
AALKPGGVLLLHGYAPRQVGYGTGGPPAEANMYELEMLRAAFPGYAVLHAADYDAEIDEG
PGHSGRSGLIDFVARKPG