Protein Info for BT4272 in Bacteroides thetaiotaomicron VPI-5482

Annotation: hypothetical protein (NCBI ptt file)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 950 996 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details PF19190: BACON_2" amino acids 42 to 119 (78 residues), 22.6 bits, see alignment 1.6e-08 PF13004: BACON" amino acids 66 to 117 (52 residues), 23 bits, see alignment 1.3e-08 amino acids 157 to 207 (51 residues), 19.9 bits, see alignment 1.2e-07 PF13402: Peptidase_M60" amino acids 569 to 849 (281 residues), 64.8 bits, see alignment E=1.9e-21 PF18630: Peptidase_M60_C" amino acids 931 to 993 (63 residues), 94.1 bits, see alignment 9.7e-31

Best Hits

KEGG orthology group: None (inferred from 100% identity to bth:BT_4272)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q89ZU9 at UniProt or InterPro

Protein Sequence (996 amino acids)

>BT4272 hypothetical protein (NCBI ptt file) (Bacteroides thetaiotaomicron VPI-5482)
MLLDKVKHILCISLILLVGVTTLYACKSDDKELQGEPVLQVQKSIGFKKEGGEVAVPVKS
NREWNASVTEGKEWLTARKASDTELTVSATSSPEKGVREGNITIANNALTAKLRVVQTGG
DLIIEVAEESRVIQVAGTGNDHLEVNLLSNTDYEVVIPEEAKDWITEKEVPDTRADLASS
TRIFSIASNPLTTERNATIKFVSKENTNIYDQSEIKQQKKSSDISGVNPEKDIKLKVTGG
YDTDHQPGQDISKSYDGQFGGTCYHSTWSQSAKFPVTLEYQFDQNQLTLDYILYHSRNGN
GNFGAFELYIKPQGSTDFIHIQDYDFKGAGGSHRILLNDPVVPAAVQFKVKSGLNDFVSC
DEMEFFHAAENPLDEQLITVFTDRSCSELLPDASDEAINRLPAFFNVLAKSLQSNTYPEA
EKRFRIQSYQAYSVPEYWGDKLRTNYYSPLCNPTGIITNAGEEMVVLADGIPQGESISLR
CCSDLGPDGEERFLKNGINKFSFSRAGNLFVIYQKLDPRGMPAVKIHFPPQYVEITEHAR
VGFNVWDLTVDKTDDLFREYIRKAKSVTLDGSDKCVFVLKGRKILFTALKDLLQNQDNFK
QYGVVRGMERWDNLIDWEQELAAIDTYSNTGEFNSLMHVTTFTDGLYATNYYINMAAGDV
STKDGWGFKNNFDPRDMDKNQDNEWGPGHELGHMHQGAINWPSTTESSNNLFSNYVVYKI
NQWGSRGSSIGTLAVYRYAPPTPWSRFMHPRDPNTLAFTPQDMTSDDANKYGLYQGEASE
MHMRLNQQLWTYFERIGKKPNTIRKIFEQGRTPEFWLPFNDPGAAQLMYARNVAKAANMD
MTEFFDAWGFFIPVSFKLYAYGSFSYTVTQDMINQTLAYMKTFSTKCPPIEYIEDRRYQV
GAKGNQKGISEDGGDVGYFETFQNNVKITKTVSYTVSGRTYTVTNGEQAVAFELIKDGKK
VWFANRFVFTVPAEADIEGAELYAVQADGQRIKANK