Protein Info for BT3545 in Bacteroides thetaiotaomicron VPI-5482

Annotation: hypothetical protein (NCBI ptt file)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 529 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details transmembrane" amino acids 35 to 55 (21 residues), see Phobius details amino acids 65 to 86 (22 residues), see Phobius details amino acids 105 to 124 (20 residues), see Phobius details amino acids 130 to 147 (18 residues), see Phobius details amino acids 152 to 169 (18 residues), see Phobius details amino acids 177 to 195 (19 residues), see Phobius details amino acids 262 to 284 (23 residues), see Phobius details amino acids 296 to 313 (18 residues), see Phobius details amino acids 318 to 335 (18 residues), see Phobius details amino acids 342 to 359 (18 residues), see Phobius details PF04932: Wzy_C" amino acids 138 to 276 (139 residues), 74.1 bits, see alignment E=5.5e-25

Best Hits

KEGG orthology group: None (inferred from 100% identity to bth:BT_3545)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8A1W3 at UniProt or InterPro

Protein Sequence (529 amino acids)

>BT3545 hypothetical protein (NCBI ptt file) (Bacteroides thetaiotaomicron VPI-5482)
MSKVSITQIGFALLCIGSVFMYSTQITDPYIVSKWLYTILFVLIITIYCSIRMLLGKSVK
FDTRLAGMSIVIVSSLQAIYGLSQCFNITTFNTFYKIMGSFENPTGFSACLCVSLPFFVV
FQLLNENKQIRYLVCFLGIIVVIAIVLSYSRAGIISVAIVIAIFLFQKLKQKRIWKYLLL
CSSLILLLFGCYWMKKNSADGRLLIWQCGINMVKDAPWIGHGLGSFEAHYMDYQANFFKQ
CGQSRFSMLADNVKQPFNEYLGLLLNFGIIGLLVLLLLMVIIIYCYRKNPSVEKQIAFYS
LSSIGIFSFFSYPFAYPFVWVVTFLSIFIITSEYIKPLFSNILIKKIACMFILTYSLFGS
SKLFERIQAELDWGKASTLALCKSYNETLPTYERLEKMFVSNPYFLYNYAAVLQEMKQYT
ESLEVALKCRQYWADYDLELIIGENYQQLNKPELAEKYYNSASMMCPSRFLPLYKLFHLY
KTNGEKERSLAMAEAVISKPMKIKTTTIRMMKREMEREIQKMNMSIKLE