Protein Info for BT3522 in Bacteroides thetaiotaomicron VPI-5482

Annotation: hypothetical protein (NCBI ptt file)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 390 signal peptide" amino acids 1 to 31 (31 residues), see Phobius details PF16342: DUF4972" amino acids 5 to 131 (127 residues), 209.1 bits, see alignment E=1.7e-66 PF13385: Laminin_G_3" amino acids 164 to 332 (169 residues), 57.6 bits, see alignment E=1.7e-19

Best Hits

KEGG orthology group: None (inferred from 100% identity to bth:BT_3522)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8A1Y6 at UniProt or InterPro

Protein Sequence (390 amino acids)

>BT3522 hypothetical protein (NCBI ptt file) (Bacteroides thetaiotaomicron VPI-5482)
MKRIMNTKYSIKKVWYYLLCMIMTLQLIACTEETHESYTAAPEVEDIYIDQLEELINKMK
DLQKNSEYGEKKGQYPTESRAILTDAIDDANRSVLLIKYQNPVPSEQEKQRYVASAKSAI
DKFKGTIRTEDAETTPAELFVDGKGGNSYIDFGRSEEYVKFGEQGHQSFTVELWVKVTER
GRWDNCLFLCSYMSDSSWRNGWMMYWRKDDNGVYRTTWGGLNTTNGDRDLWEPKFQISDD
LNKWQHFVAVYSDEGLDGNSTLRAKLYLNGELKKEETVSPTTRVYQSGHYSDYSKPMTAF
GRYMRVSDDLYEEGFSGYMKKIRIWKTAKGADYVKQSYEGTAEVTGKETDLAAGWDFTSK
PSGTDNEIIDLTGRHTAKIIGTYKWERILE