Protein Info for BT3401 in Bacteroides thetaiotaomicron VPI-5482

Annotation: conserved hypothetical protein (NCBI ptt file)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 381 PF01582: TIR" amino acids 4 to 51 (48 residues), 24.1 bits, see alignment 5.6e-09 PF13676: TIR_2" amino acids 4 to 91 (88 residues), 39.8 bits, see alignment E=1.3e-13 PF13432: TPR_16" amino acids 234 to 271 (38 residues), 17.4 bits, see alignment 1.1e-06 PF08238: Sel1" amino acids 261 to 294 (34 residues), 31.1 bits, see alignment 5e-11 amino acids 297 to 331 (35 residues), 29.4 bits, see alignment 1.8e-10 amino acids 335 to 367 (33 residues), 33.6 bits, see alignment 8.2e-12

Best Hits

KEGG orthology group: None (inferred from 100% identity to bth:BT_3401)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8A2A4 at UniProt or InterPro

Protein Sequence (381 amino acids)

>BT3401 conserved hypothetical protein (NCBI ptt file) (Bacteroides thetaiotaomicron VPI-5482)
MAPRDIRPGAEYGDIIEEAIVTCKVFLIVFSETSQISRWVRSELNIGFSSNKPIIPFRID
PTDLKGSMKLMLNDKHWLNAYPNPEEKFSELAAVILDLLQHPAVDTISPPGFQPASNVAS
ADGSNAGAQGLFGKLLNQLFVKRRVKVTSDHAAEIFLNGERKGKLDAYETGNYSVSEDFY
QLEVYSCEYGKKVKCEYSGSFSNSSTVIISVDMATAEKQYLMKAKNITSGQINDLGIIFL
DEGKFEDAQECFLKAASMGEAAAAYNLGMMYHFGKGVEIDYDVAREYYEEAVKSDYPLAL
NNLGSIYYNGHGVRKDIAKSFPYFCRAAERGVESAQFTVATMLFYGQGVAVDKAKAKKWF
QKAAAQGCKDSQNYLNSWVDD