Protein Info for BT3369 in Bacteroides thetaiotaomicron VPI-5482

Annotation: putative glycosyltransferase (NCBI ptt file)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 413 transmembrane" amino acids 96 to 114 (19 residues), see Phobius details PF00534: Glycos_transf_1" amino acids 242 to 390 (149 residues), 42.3 bits, see alignment E=8.9e-15 PF13692: Glyco_trans_1_4" amino acids 246 to 373 (128 residues), 44.3 bits, see alignment E=3.5e-15 PF13524: Glyco_trans_1_2" amino acids 276 to 406 (131 residues), 34.5 bits, see alignment E=3e-12

Best Hits

KEGG orthology group: None (inferred from 100% identity to bth:BT_3369)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8A2D6 at UniProt or InterPro

Protein Sequence (413 amino acids)

>BT3369 putative glycosyltransferase (NCBI ptt file) (Bacteroides thetaiotaomicron VPI-5482)
MSKENIAFVVVRYGLNINGGAEYHCRMLAERLTNDYNVEVLTTCVDNYRTGENLEFKEKE
IINKVIVRRFKTNPTHPELENFYKKKAKPAYKLRRFLYKCHFLAIASYFFPIWHFKEKEE
LEALGSQVFHSPALFNFIKENKDNYKAIIPITIDYSHVYYTTLYAPEKTIVIPTMHYHKT
AFRSTLTQVFTKAAYIAFNTTAEQKLARKIFGMHMAPHSIVSVGIELSAPSDWAVTQEKY
NLPDEYMLYVGRVDQGKLNNVYTYFLNYKKVYPNSDLKFVLVGKQYSDPFNHPDIIYTNF
VEEQEKISIIQHAKIVINPSLYESLSLILLEAMALKKAMLVNGNCNVLKEHCHKSNNAAL
YYTNEKSFIDKLHMLDSSTNLRLEMGEKGYSYVNSNYDWNIIMNKLKHVIENI