Protein Info for BT3276 in Bacteroides thetaiotaomicron VPI-5482

Annotation: conserved hypothetical protein (NCBI ptt file)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 868 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details PF17162: DUF5118" amino acids 42 to 91 (50 residues), 54.8 bits, see alignment 9.3e-19 PF17148: DUF5117" amino acids 100 to 300 (201 residues), 139 bits, see alignment E=2.5e-44 PF16313: DUF4953" amino acids 431 to 735 (305 residues), 233.8 bits, see alignment E=4.3e-73

Best Hits

KEGG orthology group: None (inferred from 100% identity to bth:BT_3276)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8A2M9 at UniProt or InterPro

Protein Sequence (868 amino acids)

>BT3276 conserved hypothetical protein (NCBI ptt file) (Bacteroides thetaiotaomicron VPI-5482)
MRNRYSKILCLLLLFACCLPQEGNAFWPFKKKKKEDKKENLTPYQKLFKNKKVQTAHGLM
TIHKVEGKVYVEFPVAMLGREMLFASSIENTSDGGEGAPGQLGGTDVRFRFEMIDSTLVA
RMPLLSKPVNTSGDAYIARALDNAHNPGIFKSFKVLACTPDSSALVVDMKGLFLEGSAFT
KPFPSTSANGYYGFVSRDHSLQSDKSAILGVSASENHISVREELSYTVDHTLMGAYNMYK
DVPLTAVVTKMLCILPEEPMTPRLADSRLGLTTQLKSDYSGATQEVKSIRYAKRWRIEPS
DSAAYRRGELVRPVKQLVFYIDSLMPVKWNPYIKAGAESWNKAFEKIGFKDVICVKEFPK
NDTLFNANSFDCMTIRYSASWLNSAQTTIHSDTRTGEILNASILINANMISVQYADRIGA
TVAIDPRVRTTVFPQEIQGELIQAAIAQAVGTGLGLTMNWGASCAYPVDSLRSASFTQKY
GLASSVMGGVIINDVATEEDVRNGVCLVNAKPGPYDELVIKYLYQPIYASSLQEEKETLD
SWIREHTGDPYYAYIRNQSRFDSDPRNSRGSLGDDHLKSFDYMLPNVRKGFENYYSWFAK
EDRDFLMRRRVHSALSERLSGRIYAILSYIGGIYLNDIREKDAIPSYSMVDREKQKAALS
KALELAKNLDWVDDTAHLNEFEISDKKADRLRLDIFNGIFGRLPYVEVCTERFPDAAYTA
SEYLDDIYGIVWEGVLKHRPLENFERALQTAFLESIISTSTATAPIGSFKASKTGFAATG
KPEINLAALRNGGKVDMKMYSLQNAEEVAGFSSIPPIYTNQTKIAAYYFDLLMRTKDMLK
KAISTAPEADRSHYDLLIYRINKATEIE