Protein Info for BT2918 in Bacteroides thetaiotaomicron VPI-5482

Annotation: hypothetical protein (NCBI ptt file)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 404 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details PF16323: DUF4959" amino acids 19 to 122 (104 residues), 113.5 bits, see alignment E=8.9e-37 PF17166: DUF5126" amino acids 123 to 225 (103 residues), 123.7 bits, see alignment E=4.2e-40 PF16391: DUF5000" amino acids 255 to 400 (146 residues), 167.4 bits, see alignment E=3.5e-53

Best Hits

KEGG orthology group: None (inferred from 100% identity to bth:BT_2918)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8A3N6 at UniProt or InterPro

Protein Sequence (404 amino acids)

>BT2918 hypothetical protein (NCBI ptt file) (Bacteroides thetaiotaomicron VPI-5482)
MKKKLYKYGLLYIGVALAACADNADLNEPAGSTTPPAQVLNATVKNLPGAAIIYYDLPDD
QNLKYVRASYKVDNMVRTVNASFYTDSLVVEGFPTKGEYDIELYSVSYGEVVSSPLVVKV
NPDTPPYQKVRGTLVSAETFGGIRVNFDNPEKAKLGLGVIKKQAEGIWTQVYMHYTEAKG
GDFYVRGLDAVTTDFGIFVRDRWGHLSDTLYVTETPLYEEQCDKSLFRKMALPTDSYECH
SWNEVTKGNDMTRLWDGITDADPCFQTKTTTVMPQWFTFDMGENYKLSRFVMVSRYYPGK
YGNTFKAGHPKHFEIWGSINPNPDGSFDDSWVLLSEYESVKPSGGGVNDALTAEDQEAAK
NGENFIIPDNAPAVRYIRFRTNNTWGNTRYMHLHELTFFGAKHN