Protein Info for BT2599 in Bacteroides thetaiotaomicron VPI-5482

Annotation: conserved protein found in conjugate transposon (NCBI ptt file)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 337 transmembrane" amino acids 29 to 48 (20 residues), see Phobius details amino acids 67 to 89 (23 residues), see Phobius details amino acids 173 to 189 (17 residues), see Phobius details amino acids 194 to 215 (22 residues), see Phobius details amino acids 228 to 252 (25 residues), see Phobius details amino acids 272 to 296 (25 residues), see Phobius details TIGR03782: Bacteroides conjugative transposon TraJ protein" amino acids 7 to 330 (324 residues), 583.2 bits, see alignment E=6.1e-180 PF07863: CtnDOT_TraJ" amino acids 277 to 330 (54 residues), 65 bits, see alignment 4.2e-22

Best Hits

KEGG orthology group: None (inferred from 100% identity to bth:BT_2599)

Predicted SEED Role

"Conjugative transposon protein TraJ" in subsystem Conjugative transposon, Bacteroidales

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8A4K0 at UniProt or InterPro

Protein Sequence (337 amino acids)

>BT2599 conserved protein found in conjugate transposon (NCBI ptt file) (Bacteroides thetaiotaomicron VPI-5482)
MVLLSIDFASLHTILESLYNEMMPLCEDMLGVAKGVAGLGALFYVALRVWQSMARAEPVD
VYPLLRPFALGICILLFPTLVLGTMNSILSPIVQGTHRMLEGQTLDMQQYRAQKDRLERE
AMMRNPETAYLVSDEEFDRQLDELGWSPGDAATRLGMYMEVGMYNLEKSIRDAFRSLLEL
LFAAASLLIDTVRTFFLVVLSVLGPIAFSISVWDGLQSTLGQWFTRYISVYLWLPVSDLF
SCMLAKIQVLMLQNDIAELQGNPDYSLDNSNCVYIIFMLIGIVGYFTVPTVSGWIVQAGG
GGNYSRNLNRTATKAGGFTAGAGGAALGNIGGRIRGK