Protein Info for BT2493 in Bacteroides thetaiotaomicron VPI-5482

Annotation: ROK family transcriptional repressor, with glucokinase domain (NCBI ptt file)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 326 PF00480: ROK" amino acids 11 to 318 (308 residues), 208.9 bits, see alignment E=1.2e-65

Best Hits

KEGG orthology group: K00845, glucokinase [EC: 2.7.1.2] (inferred from 100% identity to bth:BT_2493)

MetaCyc: 92% identical to glucokinase / N-acetylglucosamine kinase / mannokinase (Bacteroides fragilis)
Mannokinase. [EC: 2.7.1.7]; N-acetylglucosamine kinase. [EC: 2.7.1.7, 2.7.1.59]; Hexokinase. [EC: 2.7.1.7, 2.7.1.59, 2.7.1.1, 2.7.1.2]

Predicted SEED Role

"Glucokinase (EC 2.7.1.2)" in subsystem Entner-Doudoroff Pathway or Glycolysis and Gluconeogenesis (EC 2.7.1.2)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.7.1.1, 2.7.1.2

Use Curated BLAST to search for 2.7.1.1 or 2.7.1.2 or 2.7.1.59 or 2.7.1.7

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8A4V4 at UniProt or InterPro

Protein Sequence (326 amino acids)

>BT2493 ROK family transcriptional repressor, with glucokinase domain (NCBI ptt file) (Bacteroides thetaiotaomicron VPI-5482)
MNSNMEKPYVVGIDIGGTNTVFGIVDARGTIIASSSIKTAGYPTAAEYADEVCKNLLPLI
IANGGVDKIRGIGVGAPNGNYYTGTIEFAPNLPWKGILPLAAMFEERLGIPTALTNDANA
AAIGEMTYGAARGMKDFIMITLGTGVGSGIVINGQMVYGHDGFAGELGHVIARRDGRVCG
CGRKGCLETYCSATGVARTAREFLAARTDASLLRNIPAENITSKDVYDAAVQGDKLAQEI
FEFTGNILGEALADAIAFSSPEAIVLFGGLAKSGDYIMKPIQKAIDDNILNIYKGKTKLL
VSELKDSDAAVLGASALAWELKDLKE