Protein Info for BT1773 in Bacteroides thetaiotaomicron VPI-5482

Annotation: hypothetical protein (NCBI ptt file)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 668 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details PF12771: SusD-like_2" amino acids 31 to 296 (266 residues), 108.6 bits, see alignment E=3.6e-35 amino acids 403 to 554 (152 residues), 40.4 bits, see alignment E=1.9e-14 PF12741: SusD-like" amino acids 59 to 306 (248 residues), 95.4 bits, see alignment E=4.2e-31 amino acids 398 to 575 (178 residues), 73.6 bits, see alignment E=1.7e-24

Best Hits

KEGG orthology group: None (inferred from 100% identity to bth:BT_1773)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8A6V3 at UniProt or InterPro

Protein Sequence (668 amino acids)

>BT1773 hypothetical protein (NCBI ptt file) (Bacteroides thetaiotaomicron VPI-5482)
MKLKNKILPLLLLASTAVGCTDGFETINSDPNKLYEVNLQSIFPGTVYKTMNAISELNNN
RMWSYSRYITNVAFQTPWNERGDGFYRKFYVEILRDLEELAKAYDDGSLPNSLAVVKTWK
AFTYYQLLSLYGPVGLSHAGMDGGTDKRIFDYDSEADAYYSILGWLDQAVDEFDESSTDK
ILKDPVYNGDVQKWRKLANTLRLEIAMNIQNISEEKAREYAAKSMGHEEWLFSSLDDAFA
PKYGTVIDKDCSWYYTRLYKEEIQTKANWGLIPSMNEYFAIYLFSYNDPRMETYFDGSNV
YWPERQPYRMTDVLTRSHDCDVSGCSASDQQEHLQWMIDGYEVRDSLRVRYSIPYVPTPD
NPGARTPFGWRRPIDPTDPNGTREIPDPLSMNEDNRCYINPRYYAMDATMPLLRWADACF
LCAEAKVKFDLGSKDAQTYYEEGIRASFEENGLSASAAAYMAQEGIAWGTSHKGFYDTRK
LMTADINGADGKDGQLEQIYKQRWFADFLDGMSAWRMERRTRALNLPPLFLNGSQAYEEG
GNMYYGWPERLYFPDAERQTNAEAYYRAIDLLQKNSPKPNAARWGDNIFTMLQFAKPVPN
QEEMIAGWENSDYVQFNMDFQAKKYGQTYEEFLKNARELTGIKEAEEALDKAYNFLIEAT
LLVYKVEK