Protein Info for BT1308 in Bacteroides thetaiotaomicron VPI-5482

Annotation: clostripain-related protein (NCBI ptt file)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 399 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details PF03415: Peptidase_C11" amino acids 37 to 399 (363 residues), 435.4 bits, see alignment E=1.2e-134

Best Hits

KEGG orthology group: None (inferred from 100% identity to bth:BT_1308)

Predicted SEED Role

"Clostripain-related protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8A866 at UniProt or InterPro

Protein Sequence (399 amino acids)

>BT1308 clostripain-related protein (NCBI ptt file) (Bacteroides thetaiotaomicron VPI-5482)
MMKKIKILSLLVCLIALFTACHDEEDKTNYGSRTVLVYIAGDNSLSRFASEDLNEMIEGM
QSVDDNHNNLLVYMDKGSNPKLIRLRKDKDVVVQDVIATYDAQNSVDVDVMKNVFTTAFS
HYPADSYGVVFWSHGDGWLPYNNPSTRWWGQDTGNGDNRMNIPDLNEALSVAPHFDFILF
DACYMQSVEVVYQLRNRADYFIGSPTEIPGPGAPYEVVVPALFAVNSPAVSIAENYYSVY
AKKYNSTGAGISNENWTGGVSISVIKSSELSALAAATRDVLQTAVSMQQSHNIDISSILC
YDPLRENNYHDLMGLMQSIQGNSQAFNHYKEMYKNAVIWKNTTDNNYCTYSSGYGKMVSM
DGFEGVSTYILRENNSSQEKYYRQFVEWYSAADWDSVDW