Protein Info for BT1274 in Bacteroides thetaiotaomicron VPI-5482

Updated annotation (from data): L-fuculose-1-phosphate aldolase FucA (4.1.2.17); D-ribulose-1-phosphate aldolase
Rationale: Specifically important for utilizing L-fucose and D-arabinose, which are catabolized via L-fucolose-1-phosphate or D-ribulose-1-phosphate.
Original annotation: L-fuculose-1-phosphate aldolase (NCBI ptt file)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 212 PF00596: Aldolase_II" amino acids 15 to 184 (170 residues), 131.6 bits, see alignment E=1.6e-42

Best Hits

KEGG orthology group: None (inferred from 100% identity to bth:BT_1274)

Predicted SEED Role

"L-fuculose phosphate aldolase (EC 4.1.2.17)" in subsystem L-fucose utilization (EC 4.1.2.17)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 4.1.2.17

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8JZT1 at UniProt or InterPro

Protein Sequence (212 amino acids)

>BT1274 L-fuculose-1-phosphate aldolase FucA (4.1.2.17); D-ribulose-1-phosphate aldolase (Bacteroides thetaiotaomicron VPI-5482)
MITDEHIELFLAQAHRYGDAKLMLCSSGNLSWRIGEEALISGTGSWVPTLAKEKVSICNI
ASGTPTNGVKPSMESTFHLGVLRERPDVNVVLHFQSEYATAISCMKNKPTNFNVTAEIPC
HVGSEIPVIPYYRPGSPELAKAVVEAMLKHNSVLLTNHGQVVCGKDFDQVYERATFFEMA
CRIIVQSGGDYSVLTPEEIEDLEIYVLGKKTK