Protein Info for BT0827 in Bacteroides thetaiotaomicron VPI-5482

Annotation: hypothetical protein (NCBI ptt file)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 365 transmembrane" amino acids 169 to 187 (19 residues), see Phobius details PF18174: HU-CCDC81_bac_1" amino acids 1 to 59 (59 residues), 100.2 bits, see alignment E=7.1e-33 PF18175: HU-CCDC81_bac_2" amino acids 60 to 129 (70 residues), 77.5 bits, see alignment E=9e-26 PF05036: SPOR" amino acids 295 to 363 (69 residues), 33.7 bits, see alignment E=5.7e-12

Best Hits

KEGG orthology group: None (inferred from 100% identity to bth:BT_0827)

Predicted SEED Role

"FIG00403302: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8A9I8 at UniProt or InterPro

Protein Sequence (365 amino acids)

>BT0827 hypothetical protein (NCBI ptt file) (Bacteroides thetaiotaomicron VPI-5482)
MIELAQHIEALLLENDCVIVPNFGGFVAHYAPATYVKEENLFLPPTRIIGFNSQLKLNDG
VLVQSYMSAHDTSFADATRMVEKEVNAFVEILHEEGKADLENVGEIRYNIYGNYEFTPYD
HKITTPSLYGLDSFEMRELSALQRKERILVPASLTKEKKTYEISISRTLLRNAAAMIAVI
VMFFAFSTPVENTYVEKNNYAQLLPAELFEQIEKQSVAVTPVSVETKHNQKNATGQTKKV
TADKARTSRPIAVKEVKVAKQETTPAAPTATIPTTTAVTTPVAPAVQPQANHPFHIIVAG
GIGLKDAEAMAEQLKAKGFAEAKALNSDGKVRVSIRSFGNREEATKQLLELRKNETYKNA
WLLAK