Protein Info for p5482_07 in Bacteroides thetaiotaomicron VPI-5482

Annotation: mobilization protein B (NCBI)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 749 PF18976: DUF5712" amino acids 10 to 270 (261 residues), 234.5 bits, see alignment E=1.1e-73

Best Hits

KEGG orthology group: None (inferred from 100% identity to bth:BT_p548207)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8ABZ1 at UniProt or InterPro

Protein Sequence (749 amino acids)

>p5482_07 mobilization protein B (NCBI) (Bacteroides thetaiotaomicron VPI-5482)
MFAKVHPAEDVKSGNTGSCHDLVRYLEKETGEGQRFFSHTEQDISPERVIMDIDGNKKAL
GANDAKFFMLSLNPSQSEQMHLIGRKVDDFKELTPQEKKEVFQKLEAFTRSAMDEYALNF
GRDNIRGGQDLMYYARVETERSYHPEDEEVKQGIARIGEPKPGLNLHVHVIVSRKSLDGK
VKLSPGAKSAGNTWELEGRGTVKRGFSHEGWKVRVQECFNRKFDYQAKEGETYVRPQVSA
EIGKITNPELKRILQDEQFTAANQIVAAMREQGYTHQVRKGVHSFSREGEVFQVEHRLLK
AFEQPLSDEQLKSITERFDLTKYEANPAGYRENGLQVKDISFSTYVKDEAQKGEKALKEV
AYKVVYDEQNHTTVSFATVRQFAYEHQINLVKSEPTAEAVLKKIKNPELKNLLENYRFTS
ANQIVVAMKEQGYTHKVRKGVHSFSREGERVSIRHKDLKKFADPKLESRHMEGIIERFNL
YKYKQEGVAYRENGLEAKNISFLTYQKVPIEPEEDKSVTGKPETKEEAQQPQQETPGSEA
HPEETENEAETPMPEPDPVKYRKELKEVSYDVLFDRETKTYVPISAIRKYAYENEINLID
RYKHGYAVRNEDLRECLANPEYRTVRQINKAMRERGYTIERDEAGNYTYIKGESSFFMER
RDLLAFTGYAKDTGGRERGTHRSADKTVGFIGGKAKQKLINEILGDSFRTERMLVGNVKK
AVSLIQNPANIKMMLIKQIGSFLNPFKEL