Gene info for SO_r027 in Shewanella oneidensis MR-1

Name: Sp16SD
Annotation: 16S ribosomal RNA (RefSeq)
Type 3: 16S (small subunit) ribosomal RNA
Located on scaffold 139, - strand, nucleotides 4,945,901 to 4,947,429
See nucleotide sequence around SO_r027 or for all of scaffold 139

Other databases: MicrobesOnline

Nearby Genes

500 ntSO4732 and lypA are separated by 100 nucleotideslypA and SO4734 overlap by 44 nucleotidesSO4734 and Sp5SD are separated by 448 nucleotidesSp5SD and Sp23SD are separated by 203 nucleotidesSp23SD and Sp16SD are separated by 316 nucleotidesSp16SD and SO4737 are separated by 596 nucleotidesSO4737 and SO4738 are separated by 91 nucleotidesSO4738 and menB are separated by 118 nucleotidesmenB and SO4740 are separated by 167 nucleotidesSO4740 and glmS are separated by 80 nucleotides SO4732: SO4732 - conserved hypothetical protein (NCBI ptt file), at 4,936,774 to 4,938,579 SO4732 SO4733: lypA - lysophospholipase L2 (NCBI ptt file), at 4,938,680 to 4,939,669 lypA SO4734: SO4734 - sensory box protein (NCBI ptt file), at 4,939,626 to 4,941,920 SO4734 SO_r025: Sp5SD - 5S ribosomal RNA (RefSeq), at 4,942,369 to 4,942,488 Sp5SD SO_r026: Sp23SD - 23S ribosomal RNA (RefSeq), at 4,942,692 to 4,945,584 Sp23SD SO_r027: Sp16SD - 16S ribosomal RNA (RefSeq), at 4,945,901 to 4,947,429 Sp16SD SO4737: SO4737 - iron-sulfur cluster-binding protein (NCBI ptt file), at 4,948,026 to 4,949,453 SO4737 SO4738: SO4738 - hypothetical protein (NCBI ptt file), at 4,949,545 to 4,949,895 SO4738 SO4739: menB - naphthoate synthase (NCBI ptt file), at 4,950,014 to 4,950,916 menB SO4740: SO4740 - conserved hypothetical protein (NCBI ptt file), at 4,951,084 to 4,951,287 SO4740 SO4741: glmS - glucosamine--fructose-6-phosphate aminotransferase (isomerizing) (NCBI ptt file), at 4,951,368 to 4,953,197 glmS
Locus Name Description Strand Phenotype
SO4732 SO4732 conserved hypothetical protein (NCBI ptt file) + insig.
SO4733 lypA lysophospholipase L2 (NCBI ptt file) + strong
SO4734 SO4734 sensory box protein (NCBI ptt file) - sig.
SO_r025 Sp5SD 5S ribosomal RNA (RefSeq) - no data
SO_r026 Sp23SD 23S ribosomal RNA (RefSeq) - no data
SO_r027 Sp16SD 16S ribosomal RNA (RefSeq) - no data
SO4737 SO4737 iron-sulfur cluster-binding protein (NCBI ptt file) - strong
SO4738 SO4738 hypothetical protein (NCBI ptt file) + insig.
SO4739 menB naphthoate synthase (NCBI ptt file) + strong
SO4740 SO4740 conserved hypothetical protein (NCBI ptt file) + sig.
SO4741 glmS glucosamine--fructose-6-phosphate aminotransferase (isomerizing) (NCBI ptt file) - no data

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