Gene info for SO_r024 in Shewanella oneidensis MR-1

Name: Sp16SE
Annotation: 16S ribosomal RNA (RefSeq)
Type 3: 16S (small subunit) ribosomal RNA
Located on scaffold 139, - strand, nucleotides 4,691,979 to 4,693,507
See nucleotide sequence around SO_r024 or for all of scaffold 139

Other databases: MicrobesOnline

Nearby Genes

500 ntSO4497 and SO4498 are separated by 82 nucleotidesSO4498 and tRNA-Asp-2 are separated by 1032 nucleotidestRNA-Asp-2 and Sp5SE are separated by 34 nucleotidesSp5SE and Sp23SE are separated by 203 nucleotidesSp23SE and Sp16SE are separated by 316 nucleotidesSp16SE and SO4502 are separated by 781 nucleotidesSO4502 and SO4503 are separated by 57 nucleotidesSO4503 and SO4504 are separated by 442 nucleotidesSO4504 and SO4505 overlap by 1 nucleotidesSO4505 and SO4506 are separated by 170 nucleotides SO4497: SO4497 - ISSod5, transposase (NCBI ptt file), at 4,685,644 to 4,686,849 SO4497 SO4498: SO4498 - hypothetical protein (NCBI ptt file), at 4,686,932 to 4,687,303 SO4498 SO_t102: tRNA-Asp-2 - tRNA-Asp (RefSeq), at 4,688,336 to 4,688,412 tRNA-Asp-2 SO_r022: Sp5SE - 5S ribosomal RNA (RefSeq), at 4,688,447 to 4,688,566 Sp5SE SO_r023: Sp23SE - 23S ribosomal RNA (RefSeq), at 4,688,770 to 4,691,662 Sp23SE SO_r024: Sp16SE - 16S ribosomal RNA (RefSeq), at 4,691,979 to 4,693,507 Sp16SE SO4502: SO4502 - conserved domain protein (NCBI ptt file), at 4,694,289 to 4,695,194 SO4502 SO4503: SO4503 - formate dehydrogenase accessory protein FdhD, putative (NCBI ptt file), at 4,695,252 to 4,696,001 SO4503 SO4504: SO4504 - conserved hypothetical protein (NCBI ptt file), at 4,696,444 to 4,696,908 SO4504 SO4505: SO4505 - conserved hypothetical protein (NCBI ptt file), at 4,696,908 to 4,697,564 SO4505 SO4506: SO4506 - iron-sulfur cluster-binding protein (NCBI ptt file), at 4,697,735 to 4,699,411 SO4506
Locus Name Description Strand Phenotype
SO4497 SO4497 ISSod5, transposase (NCBI ptt file) + no data
SO4498 SO4498 hypothetical protein (NCBI ptt file) - no data
SO_t102 tRNA-Asp-2 tRNA-Asp (RefSeq) - no data
SO_r022 Sp5SE 5S ribosomal RNA (RefSeq) - no data
SO_r023 Sp23SE 23S ribosomal RNA (RefSeq) - no data
SO_r024 Sp16SE 16S ribosomal RNA (RefSeq) - no data
SO4502 SO4502 conserved domain protein (NCBI ptt file) - sig.
SO4503 SO4503 formate dehydrogenase accessory protein FdhD, putative (NCBI ptt file) - strong
SO4504 SO4504 conserved hypothetical protein (NCBI ptt file) + cofit
SO4505 SO4505 conserved hypothetical protein (NCBI ptt file) + strong
SO4506 SO4506 iron-sulfur cluster-binding protein (NCBI ptt file) + strong

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