Gene info for SO_r022 in Shewanella oneidensis MR-1

Name: Sp5SE
Annotation: 5S ribosomal RNA (RefSeq)
Type 4: 5S ribosomal RNA
Located on scaffold 139, - strand, nucleotides 4,688,447 to 4,688,566
See nucleotide sequence around SO_r022 or for all of scaffold 139

Other databases: MicrobesOnline

Nearby Genes

500 ntSp23SF and Sp16SF are separated by 316 nucleotidesSp16SF and SO4497 are separated by 1246 nucleotidesSO4497 and SO4498 are separated by 82 nucleotidesSO4498 and tRNA-Asp-2 are separated by 1032 nucleotidestRNA-Asp-2 and Sp5SE are separated by 34 nucleotidesSp5SE and Sp23SE are separated by 203 nucleotidesSp23SE and Sp16SE are separated by 316 nucleotidesSp16SE and SO4502 are separated by 781 nucleotidesSO4502 and SO4503 are separated by 57 nucleotidesSO4503 and SO4504 are separated by 442 nucleotides SO_r020: Sp23SF - 23S ribosomal RNA (RefSeq), at 4,679,660 to 4,682,552 Sp23SF SO_r021: Sp16SF - 16S ribosomal RNA (RefSeq), at 4,682,869 to 4,684,397 Sp16SF SO4497: SO4497 - ISSod5, transposase (NCBI ptt file), at 4,685,644 to 4,686,849 SO4497 SO4498: SO4498 - hypothetical protein (NCBI ptt file), at 4,686,932 to 4,687,303 SO4498 SO_t102: tRNA-Asp-2 - tRNA-Asp (RefSeq), at 4,688,336 to 4,688,412 tRNA-Asp-2 SO_r022: Sp5SE - 5S ribosomal RNA (RefSeq), at 4,688,447 to 4,688,566 Sp5SE SO_r023: Sp23SE - 23S ribosomal RNA (RefSeq), at 4,688,770 to 4,691,662 Sp23SE SO_r024: Sp16SE - 16S ribosomal RNA (RefSeq), at 4,691,979 to 4,693,507 Sp16SE SO4502: SO4502 - conserved domain protein (NCBI ptt file), at 4,694,289 to 4,695,194 SO4502 SO4503: SO4503 - formate dehydrogenase accessory protein FdhD, putative (NCBI ptt file), at 4,695,252 to 4,696,001 SO4503 SO4504: SO4504 - conserved hypothetical protein (NCBI ptt file), at 4,696,444 to 4,696,908 SO4504
Locus Name Description Strand Phenotype
SO_r020 Sp23SF 23S ribosomal RNA (RefSeq) - no data
SO_r021 Sp16SF 16S ribosomal RNA (RefSeq) - no data
SO4497 SO4497 ISSod5, transposase (NCBI ptt file) + no data
SO4498 SO4498 hypothetical protein (NCBI ptt file) - no data
SO_t102 tRNA-Asp-2 tRNA-Asp (RefSeq) - no data
SO_r022 Sp5SE 5S ribosomal RNA (RefSeq) - no data
SO_r023 Sp23SE 23S ribosomal RNA (RefSeq) - no data
SO_r024 Sp16SE 16S ribosomal RNA (RefSeq) - no data
SO4502 SO4502 conserved domain protein (NCBI ptt file) - sig.
SO4503 SO4503 formate dehydrogenase accessory protein FdhD, putative (NCBI ptt file) - strong
SO4504 SO4504 conserved hypothetical protein (NCBI ptt file) + cofit

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