Protein Info for DVUA0047 in Desulfovibrio vulgaris Hildenborough JW710

Annotation: hypothetical protein (TIGR)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 438 PF14397: ATPgrasp_ST" amino acids 324 to 392 (69 residues), 33.8 bits, see alignment E=1.1e-12

Best Hits

KEGG orthology group: None (inferred from 100% identity to dvl:Dvul_3062)

Predicted SEED Role

"FIG00603624: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q72WP2 at UniProt or InterPro

Protein Sequence (438 amino acids)

>DVUA0047 hypothetical protein (TIGR) (Desulfovibrio vulgaris Hildenborough JW710)
MQARTPVIAVARILRHAWRLGRKVVRAMRADHCPLPLPSFAYLNGEGDMARLHRACQRLD
VSRCVTAASWVRLLISTLSWPGSAFMGSVARAVRQGGDVARRYHVPRWRQVGQSYKAAMR
HNMNARLFYDFDLFRPDAPSPGSFIMPHELRIIADVLSATSMSPDITDRVAFLRRCDELG
LPCVPVLARFDPDGTVAWAEDALQQAQGRDLYLKPADWDDGLCGELWQWRSGQGCWLRHG
NRVTLDDIGARARDLSAGRTMLLQPFEPAHPVLRPLGLLGSCSVRCFTLAAIGGEPELVA
ALTRIPGGWWRAECGPEYGLTARVVDLRTGELGDGVKSRSPQRWKRHPETGEVIAGLRLP
LWDEARALATEAHRLMPDYPVMSWDIVIGTDTLRLLGGSPAPRIDTARFPAGEGMNDERF
ANFILAHCERLGAVAAVH