Protein Info for DVUA0072 in Desulfovibrio vulgaris Hildenborough JW710

Annotation: glycosyl transferase, group 1 family protein (TIGR)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 445 signal peptide" amino acids 1 to 18 (18 residues), see Phobius details PF13439: Glyco_transf_4" amino acids 12 to 220 (209 residues), 30.1 bits, see alignment E=9.2e-11 PF13692: Glyco_trans_1_4" amino acids 249 to 375 (127 residues), 76.2 bits, see alignment E=6.7e-25 PF00534: Glycos_transf_1" amino acids 252 to 383 (132 residues), 68 bits, see alignment E=1.5e-22 PF13524: Glyco_trans_1_2" amino acids 269 to 397 (129 residues), 33.8 bits, see alignment E=6.4e-12

Best Hits

KEGG orthology group: None (inferred from 100% identity to dvu:DVUA0072)

Predicted SEED Role

"Glycosyl transferase, group 1 family protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q72WL7 at UniProt or InterPro

Protein Sequence (445 amino acids)

>DVUA0072 glycosyl transferase, group 1 family protein (TIGR) (Desulfovibrio vulgaris Hildenborough JW710)
MNILTITALPAGGATYAAQRLHSALVEYGHACTLACCDPVQPGHVALNYQRPDATPFMSP
LFRYWSTLSTPETREQGACELFSDTSTLLASPALPDHIVEAADVVHLHWASGILYSPALF
RLLRNKKLVWTLHDMNPFTGGCHYHVSCERYEHECGNCPLLAHPAPNDVSLQAHRFKRLL
YRELDITMVSPSAWLADKARRSPLFTGKKVAVIPNTHDTTLFAPRDRASLRSQYGVEKDT
FIVLTGVESLDNPRKNIGCMVEAMEQFAQRRPHISFELVLFGAGGANLLASFPTRHVGSL
DAESLVDWYNMADVFVHPSRLDNLSNTLCEAQCCGTPVISFDAGGSTEAFQDGETGFISG
NQPQHLAEALDRLLSSDMESLRQKARMFAMNRFNGKNIAQRYTDIYEDDIINQEHHGMHG
PADERLASNAMDGFLKVAPFDKPAP