Protein Info for DVU0478 in Desulfovibrio vulgaris Hildenborough JW710

Annotation: Ser/Thr protein phosphatase family (TIGR)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 287 PF12850: Metallophos_2" amino acids 1 to 162 (162 residues), 40.3 bits, see alignment E=3.5e-14 PF00149: Metallophos" amino acids 1 to 80 (80 residues), 42 bits, see alignment E=1.5e-14

Best Hits

KEGG orthology group: None (inferred from 100% identity to dvu:DVU0478)

Predicted SEED Role

"Ser/Thr protein phosphatase family"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q72EU0 at UniProt or InterPro

Protein Sequence (287 amino acids)

>DVU0478 Ser/Thr protein phosphatase family (TIGR) (Desulfovibrio vulgaris Hildenborough JW710)
MRLVVLSDIHGNLGAFEAVLADIATQDVDDIISLGDNVGYGPDPGPVLRLLRQRGIDSVL
GNHEAAIADRRRRRRFNSQSREALDLTEAWLDADGRACIASMPPVLLRHGCRFVHGMPPD
SPFTYLFEFMGRRLPKVFTLFAEALCFVGHTHDLEVLRCDETGAVASVLLPTASPDVAGQ
MPPGPLPGPSPDATLATSPGAQPEGLTLSTASPRVTVQTLVLDAGARHLVNVGSVGQPRD
GDPRAKYVVWDDTARTLTVRRVAYDVAAAVRRFAEAGVAQRYIDRLG