Protein Info for DVU3314 in Desulfovibrio vulgaris Hildenborough JW710

Annotation: peptidase, U32 family (TIGR)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 658 signal peptide" amino acids 1 to 28 (28 residues), see Phobius details PF01136: Peptidase_U32" amino acids 13 to 294 (282 residues), 266.8 bits, see alignment E=1.1e-83

Best Hits

KEGG orthology group: K08303, putative protease [EC: 3.4.-.-] (inferred from 100% identity to dvu:DVU3314)

Predicted SEED Role

"Peptidase, U32 family"

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.4.-.-

Use Curated BLAST to search for 3.4.-.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q725W1 at UniProt or InterPro

Protein Sequence (658 amino acids)

>DVU3314 peptidase, U32 family (TIGR) (Desulfovibrio vulgaris Hildenborough JW710)
MHRKPEILAPAGDTSAFLAAIAAGADAVYLGLKHFSARMQADNFGLTELSRLVELAHTHD
RRVYVALNTMLKPGDPDAAGRLIARLARDVMPDALILQDLGVAEVARQAGFKGELHFSTL
ANVTHADGLRAAKAFGADRVILPRELNIDEVRSMGEACPEGLDLELFVHGALCYCVSGRC
YWSSYMGGKSGLRGRCVQPCRRVYRQKGREGRYFSCLDLSLDVLSKTLLDVPNLSSWKIE
GRKKGPHYVFHVVTAYRMLRDNPDDPQVRKDAERILKMALGRPGTHAGFLPQRSKGPTAF
DEQTSSGLLVGKIQHDKEGTVYFKPRIELLPQDYLRIGYEDEPWHATQPVPRRIPKAGSF
TLRMPRHKTPKAGTPVFLIDRREPEMMHILREWQNRLAKCHGRKATAVDFEPKLPAPVRG
RKRPDMVLRSSVPHGMETRGSRGVVTGLWLSPKSVQEVSRTVFGRMAWWLSPVIWPDEED
AHRRMVVQALRNGARHFVLNAPWQLGLFPERDDLDFIAGPFCNIGNAAALACLREHGFSA
AIVSPELAGEDLLALPKESCLPLGVVLSGFWPMGIARHQLEGVKPGEPFSSPKGEVFWAR
RYGQNTWIYPGWPLDISARRAELDAAGYAFGVRIDEYPPKNLPEARRASTFNWDLPLL