Protein Info for DVU2500 in Desulfovibrio vulgaris Hildenborough JW710

Name: ftsA
Annotation: cell division protein FtsA (TIGR)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 408 TIGR01174: cell division protein FtsA" amino acids 6 to 374 (369 residues), 487.4 bits, see alignment E=1.5e-150 PF02491: SHS2_FTSA" amino acids 81 to 158 (78 residues), 112 bits, see alignment E=2.7e-36 PF06723: MreB_Mbl" amino acids 198 to 348 (151 residues), 39.5 bits, see alignment E=6.5e-14 PF14450: FtsA" amino acids 203 to 370 (168 residues), 137.7 bits, see alignment E=5.6e-44

Best Hits

Swiss-Prot: 59% identical to FTSA_PSEAE: Cell division protein FtsA (ftsA) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)

KEGG orthology group: K03590, cell division protein FtsA (inferred from 100% identity to dvl:Dvul_0745)

Predicted SEED Role

"Cell division protein FtsA" in subsystem Bacterial Cell Division or Bacterial Cytoskeleton

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q728V2 at UniProt or InterPro

Protein Sequence (408 amino acids)

>DVU2500 cell division protein FtsA (TIGR) (Desulfovibrio vulgaris Hildenborough JW710)
MAKTDLIVGLDIGTTKICAVVGEATADGVDIVGIGTSPSTGLRKGVVVNIEQTVQSIKKA
LEEAELMAGCEIRSVYAGIAGSHIKGFNSHGVIAVKGGEVGPKDIERALDAAKAVAIPLD
REVIHILPQEYVVDDQRGIADPLGMAGVRLEVKVHIVTGAVTSAQNIVRSCHRSGLDVSD
IVLEALASSKAVLTEEEREIGVALVDLGGGTTDIAVFANDSIKHTGVLALGGQNLTNDIA
FGLRTPMISAEKIKVKYGCAMAEMVRNDELIEVPSVGGREPRRLSRQVLAEICEPRMEEI
LSLVDQELVRSGFKNQIGSGVVLTGGTALIEGCQELGEQIFNMPTRIGYPRNVGGLKDVV
NSPKFATAVGLLRYGAEKEGLELKFRIRDGNVFNRVLSRMRKWFSDIS