Protein Info for DVU2063 in Desulfovibrio vulgaris Hildenborough JW710

Annotation: conserved hypothetical protein (TIGR)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 950 984 PF12705: PDDEXK_1" amino acids 688 to 852 (165 residues), 90.5 bits, see alignment E=8.9e-30

Best Hits

KEGG orthology group: None (inferred from 100% identity to dvu:DVU2063)

Predicted SEED Role

"FIG00604212: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q72AD4 at UniProt or InterPro

Protein Sequence (984 amino acids)

>DVU2063 conserved hypothetical protein (TIGR) (Desulfovibrio vulgaris Hildenborough JW710)
MTRAKNRGHSARQPFHIVPWDCDFLEAVLQLALRLTRNRPGDAVLVFPHGRPRRHLIDRL
RNAPGVPKPCLLPQMYTVQELFTRIRAEREQRPPQTVGLLDRVGLLLECVTDLASPGTPL
CEALTAGGQRHFFPWGARLSALLEDCFSQGLRPDDLTHMEGQVAPFAASLLENLGRIHER
YTLALMERGWSTPGFDAFRAVDGLEGTPSCLEGRTVIIAGFAALNGTEERLFEHLWRHCG
ADICLHTDAAVARMGQERVHWTCEDHVRWLTSWRAEAELLHAPRAFKPRVSFCEGYDLHS
QLHELGTLLQNTEDLSSTAVVLPDTGLLMPVLHHLPTKAVNISMGYPLVRSTLFRLLETL
MRLQETRGSNGLYHWRECIDLIRHPYLKMLEVEGTRPLPEVFHMVEDRLRGGTRFADLAT
VMEEALAETDVAPGTQDLCRTLLDLCLSRWERASTPAALAEAVGFLCAVLLERGGDLWER
FPIDAECLFRLMQRVIPALRESELAATAFPQDVLFTILRETVRAERVPFEADPIGGLQVL
GMLESRLLTFRRVIVLDATDDRLPGAPPNDPLLPDSLRPQVGLPDARRRERITAHNFHRL
LAGAEEVNLLWQAGVERSGLLDDKKARSRFVEEMLWHEERAAGRLFRPGEGPLGTVTCTV
RPFESTPRHILKTDAVRDALARFFERPVSPSRLDAYLTCPFRFYHEHLCRLAPPDEVIEG
EDPAAVGTLLHEALNRFYAPWRGIEVTRDRLDPEMLERHFRQSLHESGLADRFPADALAM
LETAGPERLRRFLARQPDRTVVLHLEEAFTADVEVDGRTRRLGGRLDRVDRRGEGAVVLD
YKTGSLRTVRPDVWEDHGLWERVRTWEPAADRPLTGQDEGSREDLLDELARRMPSVQLPC
YIHLYGQATGEDVHDAAWVELRDSGDERPLFGDRCDDAVRDEAISRHIPDLMRFLLRHME
LAPAFVPRHGRHCDWCSCRKLCRV