Protein Info for DVU1887 in Desulfovibrio vulgaris Hildenborough JW710

Annotation: hypothetical protein (TIGR)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 580 PF01937: ARMT1-like_dom" amino acids 125 to 370 (246 residues), 31 bits, see alignment E=7.7e-12

Best Hits

KEGG orthology group: None (inferred from 100% identity to dvl:Dvul_1277)

Predicted SEED Role

"FIG00603770: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q72AV3 at UniProt or InterPro

Protein Sequence (580 amino acids)

>DVU1887 hypothetical protein (TIGR) (Desulfovibrio vulgaris Hildenborough JW710)
MKRLPQFDAVSDIRLRKDPYLDAWVYNLMTENNIEHLLNPTLIATPEQLRFMVALDEDQI
YMPCSDQTFSLLMQPEKTRELQEQYNRAWRIIMRIARTRSLERSVRRRIMQYCRHRFRLH
INQHIIIPSRLVKRLTSIVLTQSGQEDPWAERKQQANRRAADLLDSFTVRRALRQVPDGF
DTHGDIVDLRWRLDLAELQRLLYLANAGRAWIDTPPSPLDIEKEFATGCAASGSLGLLFG
PETEPRKKVLYLCDPDGGGIFDVAVIKTLLRMGHQVVFALKEGFYFYAPRIWDHEHDPSL
KSALEGAFVLHDNVVTKNDLLRHLREHRFVVISDGTRERTNLHRVSVTFARAWKECDVVI
ARGWRNHHTFGLSSHQFTRDIVMCWFDQQGQYHMECKPRAKGVRKFTEHDLLQKAEDIIQ
QMREARRAGRSVMFYSCIIGSVPGQTKTAIGVVDAFVRDLRERLDNTFIINPAEHFEEGM
DGDDLMFMWERVQRSGLLDVWRFQTVEDIETSFALMGRKVPSAWSGKDSTFSTGCTKEMH
IALDLQKKYRELQIIGPSPDKFFRRREYGVGKYFDVGISG