Protein Info for DVU1759 in Desulfovibrio vulgaris Hildenborough JW710

Name: mopB
Annotation: molybdenum-binding protein, HTH domain (TIGR)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 122 PF00126: HTH_1" amino acids 10 to 67 (58 residues), 46.2 bits, see alignment E=1.8e-16

Best Hits

KEGG orthology group: None (inferred from 100% identity to dvu:DVU1759)

Predicted SEED Role

"DNA-binding domain of ModE / Molybdate-binding domain of ModE" in subsystem Molybdenum cofactor biosynthesis or Transport of Molybdenum

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q72B77 at UniProt or InterPro

Protein Sequence (122 amino acids)

>DVU1759 molybdenum-binding protein,  HTH domain (TIGR) (Desulfovibrio vulgaris Hildenborough JW710)
MLFGMGRVLLLRKVEECGSLKKAAESLGMSYRAAWGKLKHSEEALGCKLVEKQGSNRDGY
RLTDEGRRITEGYEAWFQSVERHALEAARELLPWKVGAFGGTPVGGCGETVEPSQCDVSK
TE