Protein Info for DVU1021 in Desulfovibrio vulgaris Hildenborough JW710

Annotation: conserved hypothetical protein (TIGR)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 388 PF01458: SUFBD_core" amino acids 131 to 359 (229 residues), 135.1 bits, see alignment E=1.4e-43

Best Hits

Swiss-Prot: 50% identical to Y2365_ARCFU: UPF0051 protein AF_2365 (AF_2365) from Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)

KEGG orthology group: K07033, (no description) (inferred from 100% identity to dvl:Dvul_1973)

Predicted SEED Role

"Iron-sulfur cluster assembly protein SufB" in subsystem Staphylococcal phi-Mu50B-like prophages

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q72DA8 at UniProt or InterPro

Protein Sequence (388 amino acids)

>DVU1021 conserved hypothetical protein (TIGR) (Desulfovibrio vulgaris Hildenborough JW710)
MSFKKVDLSRYQFDGAQASSIGDLTQLDAADKQRLLYAGIDVNQQNLAGSFMHMNHSGVH
CTSRQEGLEILDIKQALDTYHGLPDYFWKLVDRNKDEYTRAADEHLHGGYFIRARAGAKI
EAPVQSCLFIKGNGVGQNVHNVVVVEEGAEMHIITGCATAHDTRSVAHLGISEFYVHKGG
KLTFTMIHNWGEEAAVRPRSAGYLEEDAVFLSNYVLLKPVTDLQMYPTITLGGRGSVARF
NSVIVAPTGSYVDTGNRILLEAPDTRGEIIARTMTTGGTIINRGHIAGHAVPARGHLECK
GLILGGGVIHAIPELEGTQDGVELSHEAAVGKIAQEEIEYLMARGLDEDEATSTIVRGFL
NVDIMGLPEELEKAVEEQINQLDAGDAM