Protein Info for DVU0932 in Desulfovibrio vulgaris Hildenborough JW710

Annotation: sensor histidine kinase (TIGR)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 391 PF02518: HATPase_c" amino acids 273 to 376 (104 residues), 54.1 bits, see alignment E=1.9e-18 PF14501: HATPase_c_5" amino acids 277 to 359 (83 residues), 22.1 bits, see alignment E=1.2e-08

Best Hits

KEGG orthology group: None (inferred from 100% identity to dvu:DVU0932)

Predicted SEED Role

"Signal transduction histidine kinase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q72DJ7 at UniProt or InterPro

Protein Sequence (391 amino acids)

>DVU0932 sensor histidine kinase (TIGR) (Desulfovibrio vulgaris Hildenborough JW710)
MSACHETYCAPPERVTPDELQRQVALFRSIPLTELLDAVGEVVLVLNTCRQVVHANRNLL
SLLGLQEAAHLFGQRPGEVLQCEHACEGPNGCGTAEGCRPCGALQSILAGIGGERVEGEC
RITRTLQGRLSACDFKVCATPMTREGDHFVILSMSDISHEKRRSALERIFFHDLLNMAGG
LRSISGLLVEDVPLDVRADMLLVHRYATALVEEILAQRVLVAAENDELGVELRDVQAREV
LRDVIELYRTHEACIDKRLVMEPCGGHLLISTDRVLLARVLGNLVKNALEASPRGGVVTA
GCEATPSGVTFRVHNAGFISPEVRAQMFQRSFSTKGQGRGLGMYGVRLLTGNYLGGRVEC
LSSRDSGTTLLVILPRYLKHRQDGKERPDAD