Protein Info for DVU0740 in Desulfovibrio vulgaris Hildenborough JW710

Annotation: membrane protein, putative (TIGR)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 391 signal peptide" amino acids 15 to 15 (1 residues), see Phobius details transmembrane" amino acids 16 to 33 (18 residues), see Phobius details amino acids 56 to 76 (21 residues), see Phobius details amino acids 81 to 103 (23 residues), see Phobius details amino acids 105 to 105 (1 residues), see Phobius details amino acids 109 to 131 (23 residues), see Phobius details amino acids 143 to 161 (19 residues), see Phobius details amino acids 167 to 187 (21 residues), see Phobius details amino acids 208 to 232 (25 residues), see Phobius details amino acids 244 to 262 (19 residues), see Phobius details amino acids 274 to 291 (18 residues), see Phobius details amino acids 297 to 319 (23 residues), see Phobius details amino acids 331 to 354 (24 residues), see Phobius details amino acids 360 to 379 (20 residues), see Phobius details PF07690: MFS_1" amino acids 20 to 308 (289 residues), 61.1 bits, see alignment E=4.7e-21

Best Hits

KEGG orthology group: None (inferred from 100% identity to dvl:Dvul_2230)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q72E39 at UniProt or InterPro

Protein Sequence (391 amino acids)

>DVU0740 membrane protein, putative (TIGR) (Desulfovibrio vulgaris Hildenborough JW710)
MPLIPAVPGLADRRMYVFLLLLTLGSGMSFQGWNTLYTNFAVHGAGLSGAENGLVQSIRE
VPGLLTFGVIPLLLLLREHRLAALAVLVTGVGVMTAGLLPTLWGVVATTLVMSFGFHYFE
AVNQSLILQYFDVRTAPLVMGRLRGLAAGGNLVMGALVYVLADLFAFSTLFCIMGAFATV
AGAWALTRDPSDPARPAQRRSMVLRRRYWLFYLLTILAGARRQIFTVFSVFLLVEHFGYG
VREVALLFIVNNAVNWFLNPLIGRAVNRFGEQHLLTVEYSVLVLVFLGYTVTDSPLVAAF
LYVVDHIFFNFAIAIRTFFQKIADPADIAPSMAMSVAINHIAAVVMPVCGGMLWMLDYRI
PFYVGAGLAVASLLATQRIGAELRLQGVKPC