Protein Info for SO1461 in Shewanella oneidensis MR-1

Annotation: protein kinase, putative (NCBI ptt file)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1376 PF08378: NERD" amino acids 13 to 123 (111 residues), 51.4 bits, see alignment E=5e-17 PF07714: PK_Tyr_Ser-Thr" amino acids 234 to 451 (218 residues), 62.6 bits, see alignment E=1.3e-20 amino acids 509 to 745 (237 residues), 76.6 bits, see alignment E=7.2e-25 PF00069: Pkinase" amino acids 237 to 455 (219 residues), 89.2 bits, see alignment E=1.1e-28 amino acids 504 to 708 (205 residues), 114.2 bits, see alignment E=2.6e-36 PF01163: RIO1" amino acids 541 to 652 (112 residues), 22.1 bits, see alignment E=3.7e-08

Best Hits

KEGG orthology group: K00924, [EC: 2.7.1.-] (inferred from 100% identity to son:SO_1461)

Predicted SEED Role

"protein kinase, putative"

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.7.1.-

Use Curated BLAST to search for 2.7.1.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8EGX7 at UniProt or InterPro

Protein Sequence (1376 amino acids)

>SO1461 protein kinase, putative (NCBI ptt file) (Shewanella oneidensis MR-1)
MAQVSAIGDVVNDEERKAIAWLKEKLPDDYFIIHSFEVEQYDQLFEVDICVVAPHAIYLV
DAKGIHGKVEVDGTMWHTAYNSYRSPLPKLRGNAKSLSGLICKQNRANRDLKNIYVDAAV
VLTIDDCEFKDPEDRERGHVVALKNSTRFFTDSTRIPERFERNVTKYIQIIEEALGKSAK
KRSHGVRFGNWEVAETLVDNQYFTEYRVFNITAGRKGGTVLAKAYKADPYLPDEERSKQK
RLIENAYRAIAKMPSHSAIIGVKDFFVTEAQDKYLLLTDDIPGEILSKKLKAASSLLTLD
QKKRIVNDLLLALAHLCRNGVVHRNITPEHILMGADGQPRLIDFDYARIGAENTTTIADE
VQQRISNRYKAPELWADSHAASCATDIYSLGLVIFELFSGDAAFDSVTQAIEKSCVLSTK
LSESNKQLPTEFDGWLQTLCHKEALQRPSPEDALAQFNALWHPKAVETTEPNKPEQLSVK
APNNHEPSVNYKRLPSGYHLTNKYVVQQPLGKPGGFGIVYKVTDTFGDVSRAVKLILNDR
ESVLERLKQEYRTLVKLPEHPYVVKVYDADVLPNQGPPYIVFEYLEGLDVSELIQQRSLT
AHEVWTMAKQVAEGLQHLHEHNIFHCDIKPQNLMWKDGKVRIIDFNVSVDAEDLTLGGGS
RKYLPPDLSITETPQSSDLVDRDLYALGITLYRAMTGEYPWANVQCPPMDELARHPSEFT
QSFNLTDDVSAVLLKLIAPKRVDRFESAEQLLKALNKVQQLKKAQTLSEESTSQFHLPPL
ADGSNPSKSAFHDFMLTLYSQSRHSNAGTRGLDDYARLIYVETALDTELAPAILAGQLRL
VLITGNAGDGKTAFLQQLESQVEAQGTSVHLNPQGNGSWFEINGHKYLTNYDGSQDEGSK
DNDAVLEEFFSVYQGNDSNTWPHHETRLIAINEGRLVDFLSQHSEGFSALKAVVEQSLKD
GSVQNDVAVVNLNMRDVLASTQSQPESIFERIIGKMTLAKVWQGCDYCALKDKCYVKHNI
ATFQDEQTGPKVIERLKYIYKLTSLRNQLHITMRDLRSALSYTLVGEYSCNEIKEIYANG
EADKILHGYYFNAWCGNDNTQDRLLKLLRETDIAQGSDVRLDRGLDFLGLDAVDWFQFEQ
RSEHETQLLANAHQSLPNGTALSESKERYLTHRNVVGMLRRRAYFERRGENWQALLPYRS
AKLLVRYLEDSALLNEAKSLAINAINRGEGLHNPMYFNGQLAMQVRKVHLGTIRSYRLFP
SDVFSIEVKDSAMNSSFVEHSPQSLLLKYQDATGLTAELELDLDLFEILHRLNQGYVPSA
QAEQSFYLSLTVFKNVLASAPYQEVLLTTNGQQYEKITRDEGGVLQLERLVAEVQP